| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3754 |
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| Symbol | |
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| ID | 8327946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4414475 |
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| End bp | 4416316 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644944245 |
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| Product | ABC transporter transmembrane region |
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| Protein accession | YP_003101483 |
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| Protein GI | 256377823 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.116162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGGCG GCGGGCCCTT CGGGGGCGGG ATGCCGCCGA TGGGCAAGGC CCACGACTTC
AAGCCGTCCG CCAAGCGGCT GGTCGGCAGG TTGAGCCCGG AGCGCGTGCC GTTCATCGGG
GTCGTCGTGC TCGGCGTGGC CAGCGTCGCG CTGTCCGTCG CCGGGCCCAA GGTCCTCGGG
CACGCCACCG ACATCATCTT CAACGGCGTC CTCGCCCGGA TGCGCGGCGT CCCCGGCGCG
GGCATCGACT TCGCCGCGCT CGGCTCGGTC CTGTCCTGGG TGCTCGGCCT CTACGTGGCG
TCGTCGGTGT TCGGCTACGT CCAAGGGCTC CTGCTCAACG GCGTCGTGCA GCGCGTGGTC
TACCGGCTGC GCGCCGACGT CGAGGACAAG CTGCACCGCC TCCCGCTGCG CTACTTCGAC
AGCCAACCGC GCGGTGAGCT GCTGTCACGG GTCACCAACG ACATCGACAA CATCGCCACC
ACCCTCCAGC AGACCATGAG CCAGCTGCTC GTCTCCGGTC TGACGCTGAT CGGCGTGCTG
GCGATGATGG TGTCGATCTC CCCGCTGCTC GCGCTGATCG CACTGGCCCT GATCCCGCTG
TCGATCATCA TCACCTCGCG CATCCGCAAG CGGTCGCAGG CGCTGTTCGT GGCGCAGTGG
AAGCACACGG GCGACCTGAA CGCGCACATC GAGGAGGCGT TCAGCGGCCA CCAGCTCGTC
AAGGTGTTCG GCCGCCAGCG CGAGTCCGAA GAGGAGTTCC GCCGCCGCAA CGACGACCTG
CTCGGCTCGG CGCTGGGCGC GCAGTTCATC TCCGGCCTGA TCATGCCGCT GATGATGTTC
CTGTCGAACG TCGGCTACGT CGCGATCGCC GTGGTCGGCG GCCTGCGGGT GACGTCGGGC
TCGATGACGC TCGGCGAGGT GCAGGCGTTC ATCCAGTACT CCCGCCAGTT CACCCAGCCG
CTGACCCAGG TGGCGGCGAT GGCGAACCTG CTCCAGTCCG GCGTCGCCTC GGCCGAGCGG
GTGTTCGAGC TGCTCGACGC CGAGGAGCAG GTCCCCGACC CGGTCGAGGA GCAGCTGCCC
GCGACCCGCA GGGGCCGGGT GGAGTTCCAC GACGTCAGCT TCTCCTACCT TCCCGAGCAG
CCGCTGATCA AGCACCTGTC GCTGGTCGCG GAGCCGGGCA GCACGGTCGC GATCGTCGGC
CCGACCGGCG CGGGCAAGAC CACGCTGGTC AACCTCGTGA TGCGCTTCTA CGAGCTGGAC
GAGGGCCGCA TCACCCTGGA CGGCGTGGAC ATCACCGCGC TCAAGCGTGA GGACCTGCGC
TCGCAGATCG GCATGGTCCT CCAGGAGACG TGGCTGTTCG GCGGCACGAT CAGGCAGAAC
ATCGCCTACG GCAGGCCGGA CGCGACCGAG GAGGAGATCC TGACCGCCGC CAGGGCGACC
TACGTGGACC GCTTCGTCCG CACCCTGCCC GACGGCTACG ACACCTTGAT CGACGAGGAG
GGCGGCAACG TCAGCGCGGG CGAGAAGCAG CTGCTGACGA TCGCGCGGGC GTTCCTGGCC
AACCCGTCCC TGCTGATCCT GGACGAGGCC ACCAGCTCGG TCGACACCCG GACCGAGTCG
CTGGTCCAGC ACGCGATGGC GGCGCTCCGC TCCTCCAGGA CCAGCTTCGT GATCGCCCAC
CGCCTGTCGA CCATCCGCGA CGCCGACCTG ATCCTGGTGA TGGAAGCGGG CCGGATCGTG
GAGCAGGGCA CGCACGAGGA GCTGATCACG AAGGAAGGCG CCTACCACCG GCTGTACTCG
GCCCAGTTCG CGGAAGTGGG GGAACACGAC GAGAAGAGCT GA
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| Protein sequence | MGGGGPFGGG MPPMGKAHDF KPSAKRLVGR LSPERVPFIG VVVLGVASVA LSVAGPKVLG
HATDIIFNGV LARMRGVPGA GIDFAALGSV LSWVLGLYVA SSVFGYVQGL LLNGVVQRVV
YRLRADVEDK LHRLPLRYFD SQPRGELLSR VTNDIDNIAT TLQQTMSQLL VSGLTLIGVL
AMMVSISPLL ALIALALIPL SIIITSRIRK RSQALFVAQW KHTGDLNAHI EEAFSGHQLV
KVFGRQRESE EEFRRRNDDL LGSALGAQFI SGLIMPLMMF LSNVGYVAIA VVGGLRVTSG
SMTLGEVQAF IQYSRQFTQP LTQVAAMANL LQSGVASAER VFELLDAEEQ VPDPVEEQLP
ATRRGRVEFH DVSFSYLPEQ PLIKHLSLVA EPGSTVAIVG PTGAGKTTLV NLVMRFYELD
EGRITLDGVD ITALKREDLR SQIGMVLQET WLFGGTIRQN IAYGRPDATE EEILTAARAT
YVDRFVRTLP DGYDTLIDEE GGNVSAGEKQ LLTIARAFLA NPSLLILDEA TSSVDTRTES
LVQHAMAALR SSRTSFVIAH RLSTIRDADL ILVMEAGRIV EQGTHEELIT KEGAYHRLYS
AQFAEVGEHD EKS
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