| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3737 |
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| Symbol | |
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| ID | 8327927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4392993 |
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| End bp | 4395221 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644944226 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003101466 |
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| Protein GI | 256377806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGACGT CCGAGGTGCC GTCGTCCGGG GACTTCGCGG AGGACGCCCC ATCACCTGAC
CGGAGCCCCG ACGGAAGCGC GCAGGTGCGC AACACCATGT CCGGTGCCGC AGGCGTGGTG
CTGCAGGCCG GTGTGGTGCA CGGCGAGGTG CACCTGCACG CAGCGCTCCC GCCACCAGCG
CCCCTCGTCC CGCAGCAACT GCCAGCCGCA CCCGGACCGT TCGCCGGGAG GGTGGCGGAG
CTGTCCAGGC TGGACCGAGC CCTGACCGCC ACCGCACCGC ACGGGTCGCC CCCGACAGCG
GGCGCGGCGG TGCTGGTCTC AGCGATCGGC GGGGCAGGCG GCATCGGCAA GACCTGGCTG
GCGCTGGCCT GGGCCCACCA CCGGCTGGAG CGGTTCCCCG ACGGGCAGCT GTTCGTGGAC
CTGCACGGTT TCAGCCCGGT GGACGCCCCG GTGGAGCCCG CGATGGCAGT GCGCGGTTTC
CTCGACGCCC TCGGCGTCGC CCCCGGCCGC GTCCCCGCCG ACCTCGGTGC CCAGACCGCG
CTCTACCGCA GCCTGCTCGC CGGACGGCGG ATGCTGATCG TGCTGGACAA CGCCGCCACC
GCCGAGCAGG TCGTGCCCCT TCTGCCCGGC TCGCCGACCT GCACGGTGCT GGTCACCGGC
CGCCACCGGC TGGCCTCGCT GATCGACAGG CACGGCGCCC GCCACCTGTC CCTCGACGGC
CTGTCCCACG ATGAGGCCCG GACCCTGCTG ACCGCCCGAC TGGGCGCCGC CCGCATCGCC
TCCGCCTCCG CCGCCGTGGA CGAGCTGATC AGGCTGTGCG GGGGACACCC GCTCGCGTTG
TCGATCACCG CCCGCAACGT GGACACCAGC CCTGGCGCGC CGCTGGCCGA GGTGGCCGCC
GAGCTGCGCG AACTCGGACT GGAGGCGTTC GACCACGACA CCGACCCCGC AGCCAGCCTC
CCCACAGTCC TGTCCTGGTC CCTGCGCAGA CTCACCGACG AGCAGCGCGT CGTGTTCAGC
CTGCTCGGCA TCGCCCCCGG CCCGGACACG ACCCCACCCG CCACCGCCGC CCTCACCCGC
CTGTCCTCCG CTCACGCGCG CCGGGCGCTG GCCGCGCTGG AAGGCGCCTC CCTGGTCGAA
CGTCGGCCGG GCGGGAGGTA CGCGATGCAC GACCTGGTCC GCCGCTACGC CGCGGACACC
GCTGAGGAAC TGCCGGAAGG CGTGCGGGAA GTGGCCTTGA CGCGAGTGGT GGACTTCCAC
CTGCACACCG CCTACGCCGC CGAGCGCCTC CTGGCCCCTC ATCGTGAGCT CTTACCGCCC
GGCCCACCCG CGCCTGGCGT CCGTCCCTCT CCGCTGCCCG ACGCGGCAGC CGCACTCGCC
TGGCTGGACG TCGAGTACAC CACCCTGCTG GCCGCCCAGC GCACCGCCAC CGCCCGCGGT
CGCCATGACG CGGCCTGGCA CCTCGCCTGG AACCTGCACA CCTTCCAGCT CCGACGGGGC
CACCGGCACG ACATGCTCGC GGTGTGGCGG GCGGCTCTGA ACGCGGCACC CCACCTGCCC
GACCCCACCG CTCGCAGCCG CAGCCTCCGG TTCCTCGGCC GCGCTTGCTC CCGGTTGGGA
CTGCACGAAC AGGCCATCGC ACACCTGGAC CGGGCGCTGG ACCTGGCCGC GGAGCGCGAT
GACCCCACCG AGCAGGCACT CACCCACCGG CAGCTCGCCA CTGCCTGGGA CCTGAACGGG
GATGGTCGGC GTGCCCTGGA ACACGCCCGG CGCACCCTCC ACCTCTACCG CAGCCTCGAC
AAGCCGGTGT GGGAAGCCGA CGCGCTCAAC GCGGTGGGCT GGTACGCCGC ACGCGTGAAC
GAGTTCGACA CCGCTTACAC CCACTGCCGG GCAGCGCTCC CGCTGTTCCA ACGGCACCAC
GAGCGCGACG GCGAGGCGAA CACCCTCGAC AGCCTCGGCT ACATCGCCCA GCGCAGGGGC
GAGCACCAGC AAGCCCTCGA CCACTACCAC CGAGCCCTCG CGCTGTACCG CGACCTCGGC
CATGCCCCCG AGGTCGCGAA CACCCTCGAC CACATGGGTC ACCCCCACGC CGCGCTCGGA
CAGCACGCCC AGGCCCGCGC ACGGTGGGAG GAGGCCCTGG AGCTGTACCT GGAACAGGGC
CGCGAAGAGG ACGCCTCCCG CGTGCGGCGG GAACTTGACG ACGCCCGCCA CGTCGCGGAC
GACCGGTGA
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| Protein sequence | MVTSEVPSSG DFAEDAPSPD RSPDGSAQVR NTMSGAAGVV LQAGVVHGEV HLHAALPPPA
PLVPQQLPAA PGPFAGRVAE LSRLDRALTA TAPHGSPPTA GAAVLVSAIG GAGGIGKTWL
ALAWAHHRLE RFPDGQLFVD LHGFSPVDAP VEPAMAVRGF LDALGVAPGR VPADLGAQTA
LYRSLLAGRR MLIVLDNAAT AEQVVPLLPG SPTCTVLVTG RHRLASLIDR HGARHLSLDG
LSHDEARTLL TARLGAARIA SASAAVDELI RLCGGHPLAL SITARNVDTS PGAPLAEVAA
ELRELGLEAF DHDTDPAASL PTVLSWSLRR LTDEQRVVFS LLGIAPGPDT TPPATAALTR
LSSAHARRAL AALEGASLVE RRPGGRYAMH DLVRRYAADT AEELPEGVRE VALTRVVDFH
LHTAYAAERL LAPHRELLPP GPPAPGVRPS PLPDAAAALA WLDVEYTTLL AAQRTATARG
RHDAAWHLAW NLHTFQLRRG HRHDMLAVWR AALNAAPHLP DPTARSRSLR FLGRACSRLG
LHEQAIAHLD RALDLAAERD DPTEQALTHR QLATAWDLNG DGRRALEHAR RTLHLYRSLD
KPVWEADALN AVGWYAARVN EFDTAYTHCR AALPLFQRHH ERDGEANTLD SLGYIAQRRG
EHQQALDHYH RALALYRDLG HAPEVANTLD HMGHPHAALG QHAQARARWE EALELYLEQG
REEDASRVRR ELDDARHVAD DR
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