Gene Amir_3737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3737 
Symbol 
ID8327927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4392993 
End bp4395221 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content74% 
IMG OID644944226 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003101466 
Protein GI256377806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGACGT CCGAGGTGCC GTCGTCCGGG GACTTCGCGG AGGACGCCCC ATCACCTGAC 
CGGAGCCCCG ACGGAAGCGC GCAGGTGCGC AACACCATGT CCGGTGCCGC AGGCGTGGTG
CTGCAGGCCG GTGTGGTGCA CGGCGAGGTG CACCTGCACG CAGCGCTCCC GCCACCAGCG
CCCCTCGTCC CGCAGCAACT GCCAGCCGCA CCCGGACCGT TCGCCGGGAG GGTGGCGGAG
CTGTCCAGGC TGGACCGAGC CCTGACCGCC ACCGCACCGC ACGGGTCGCC CCCGACAGCG
GGCGCGGCGG TGCTGGTCTC AGCGATCGGC GGGGCAGGCG GCATCGGCAA GACCTGGCTG
GCGCTGGCCT GGGCCCACCA CCGGCTGGAG CGGTTCCCCG ACGGGCAGCT GTTCGTGGAC
CTGCACGGTT TCAGCCCGGT GGACGCCCCG GTGGAGCCCG CGATGGCAGT GCGCGGTTTC
CTCGACGCCC TCGGCGTCGC CCCCGGCCGC GTCCCCGCCG ACCTCGGTGC CCAGACCGCG
CTCTACCGCA GCCTGCTCGC CGGACGGCGG ATGCTGATCG TGCTGGACAA CGCCGCCACC
GCCGAGCAGG TCGTGCCCCT TCTGCCCGGC TCGCCGACCT GCACGGTGCT GGTCACCGGC
CGCCACCGGC TGGCCTCGCT GATCGACAGG CACGGCGCCC GCCACCTGTC CCTCGACGGC
CTGTCCCACG ATGAGGCCCG GACCCTGCTG ACCGCCCGAC TGGGCGCCGC CCGCATCGCC
TCCGCCTCCG CCGCCGTGGA CGAGCTGATC AGGCTGTGCG GGGGACACCC GCTCGCGTTG
TCGATCACCG CCCGCAACGT GGACACCAGC CCTGGCGCGC CGCTGGCCGA GGTGGCCGCC
GAGCTGCGCG AACTCGGACT GGAGGCGTTC GACCACGACA CCGACCCCGC AGCCAGCCTC
CCCACAGTCC TGTCCTGGTC CCTGCGCAGA CTCACCGACG AGCAGCGCGT CGTGTTCAGC
CTGCTCGGCA TCGCCCCCGG CCCGGACACG ACCCCACCCG CCACCGCCGC CCTCACCCGC
CTGTCCTCCG CTCACGCGCG CCGGGCGCTG GCCGCGCTGG AAGGCGCCTC CCTGGTCGAA
CGTCGGCCGG GCGGGAGGTA CGCGATGCAC GACCTGGTCC GCCGCTACGC CGCGGACACC
GCTGAGGAAC TGCCGGAAGG CGTGCGGGAA GTGGCCTTGA CGCGAGTGGT GGACTTCCAC
CTGCACACCG CCTACGCCGC CGAGCGCCTC CTGGCCCCTC ATCGTGAGCT CTTACCGCCC
GGCCCACCCG CGCCTGGCGT CCGTCCCTCT CCGCTGCCCG ACGCGGCAGC CGCACTCGCC
TGGCTGGACG TCGAGTACAC CACCCTGCTG GCCGCCCAGC GCACCGCCAC CGCCCGCGGT
CGCCATGACG CGGCCTGGCA CCTCGCCTGG AACCTGCACA CCTTCCAGCT CCGACGGGGC
CACCGGCACG ACATGCTCGC GGTGTGGCGG GCGGCTCTGA ACGCGGCACC CCACCTGCCC
GACCCCACCG CTCGCAGCCG CAGCCTCCGG TTCCTCGGCC GCGCTTGCTC CCGGTTGGGA
CTGCACGAAC AGGCCATCGC ACACCTGGAC CGGGCGCTGG ACCTGGCCGC GGAGCGCGAT
GACCCCACCG AGCAGGCACT CACCCACCGG CAGCTCGCCA CTGCCTGGGA CCTGAACGGG
GATGGTCGGC GTGCCCTGGA ACACGCCCGG CGCACCCTCC ACCTCTACCG CAGCCTCGAC
AAGCCGGTGT GGGAAGCCGA CGCGCTCAAC GCGGTGGGCT GGTACGCCGC ACGCGTGAAC
GAGTTCGACA CCGCTTACAC CCACTGCCGG GCAGCGCTCC CGCTGTTCCA ACGGCACCAC
GAGCGCGACG GCGAGGCGAA CACCCTCGAC AGCCTCGGCT ACATCGCCCA GCGCAGGGGC
GAGCACCAGC AAGCCCTCGA CCACTACCAC CGAGCCCTCG CGCTGTACCG CGACCTCGGC
CATGCCCCCG AGGTCGCGAA CACCCTCGAC CACATGGGTC ACCCCCACGC CGCGCTCGGA
CAGCACGCCC AGGCCCGCGC ACGGTGGGAG GAGGCCCTGG AGCTGTACCT GGAACAGGGC
CGCGAAGAGG ACGCCTCCCG CGTGCGGCGG GAACTTGACG ACGCCCGCCA CGTCGCGGAC
GACCGGTGA
 
Protein sequence
MVTSEVPSSG DFAEDAPSPD RSPDGSAQVR NTMSGAAGVV LQAGVVHGEV HLHAALPPPA 
PLVPQQLPAA PGPFAGRVAE LSRLDRALTA TAPHGSPPTA GAAVLVSAIG GAGGIGKTWL
ALAWAHHRLE RFPDGQLFVD LHGFSPVDAP VEPAMAVRGF LDALGVAPGR VPADLGAQTA
LYRSLLAGRR MLIVLDNAAT AEQVVPLLPG SPTCTVLVTG RHRLASLIDR HGARHLSLDG
LSHDEARTLL TARLGAARIA SASAAVDELI RLCGGHPLAL SITARNVDTS PGAPLAEVAA
ELRELGLEAF DHDTDPAASL PTVLSWSLRR LTDEQRVVFS LLGIAPGPDT TPPATAALTR
LSSAHARRAL AALEGASLVE RRPGGRYAMH DLVRRYAADT AEELPEGVRE VALTRVVDFH
LHTAYAAERL LAPHRELLPP GPPAPGVRPS PLPDAAAALA WLDVEYTTLL AAQRTATARG
RHDAAWHLAW NLHTFQLRRG HRHDMLAVWR AALNAAPHLP DPTARSRSLR FLGRACSRLG
LHEQAIAHLD RALDLAAERD DPTEQALTHR QLATAWDLNG DGRRALEHAR RTLHLYRSLD
KPVWEADALN AVGWYAARVN EFDTAYTHCR AALPLFQRHH ERDGEANTLD SLGYIAQRRG
EHQQALDHYH RALALYRDLG HAPEVANTLD HMGHPHAALG QHAQARARWE EALELYLEQG
REEDASRVRR ELDDARHVAD DR