| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3732 |
|---|
| Symbol | |
|---|
| ID | 8327922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4385538 |
|---|
| End bp | 4386389 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944221 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003101461 |
|---|
| Protein GI | 256377801 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGC TCATCCCGGA GCAGCGACGG CAGGAGATCC TGCGCAGGCT CAGGCAGGCG
CAGGTGCTCA GCTACCACCA GCTCACCGAG CTCATCGGCG TCAGCCACAT GACCATCCGC
AGGGACATCG CCGCGCTGGA GAAGCTGGGC AGCGTCGAGG TCACCCCCGG CGGCGCGAAG
ATCGCCACCA GGCTGCTGCG CGAACCGGAC CGGGCCGAGA AGACCGGCTC CGACCGGGCG
GCGAAGACCG CGATGGCCCG CGCCGCCGCC GCCATGGTCA CCGACTCGAT GACGGTGTAC
CTGGACGCCG GGACCACGGT GCAGGCCATG CGGCCGTTCC TGGACGGCGC GCGGGACCTG
ACCGTGGTCA GCAACGACCT GGCGACCGTG GCCGACTTCT GCGACCACCC CGGCGTCGAC
CTGATCTGCC TGGGCGGGCG GGTGGAGGTG TCGAACCAGT CCACGGTCGG GCGGCTCGCG
ACGCTGGCGC TGCGGGAGCT GTCGCTGGAC GTGGCGTTCC TGTCGTCGAG CTCGTGGGAC
GTGGAGCACG GGGTGAGCAC GCCGGTGGAG GCGAAGGTCG ACGTGAAGCG GGCGGCGCTG
GCCGCGGCGA CGACGTCGGT GCTGGTGGCG GGGAGCGCGA AGTACGGGCG GTTCGCGCGG
TACCGGGCGC TGCGGCTGGA CGAGATCGAC ACGATCGTGA CGGACGACGA GCTGCCCGAC
GAGGCGGCGG CGCGGGTCGG GGCGACCGGG GTGACGCTGG TGCGGGCGGG GGTCGGCGCG
GAGGCCGGTG GTCCGACTGG TGACGCCGCC GAGGCTGCCG ACGCGACGGA GGCCGGTGGC
GCGGCGGGCT AG
|
|---|
| Protein sequence | MAPLIPEQRR QEILRRLRQA QVLSYHQLTE LIGVSHMTIR RDIAALEKLG SVEVTPGGAK
IATRLLREPD RAEKTGSDRA AKTAMARAAA AMVTDSMTVY LDAGTTVQAM RPFLDGARDL
TVVSNDLATV ADFCDHPGVD LICLGGRVEV SNQSTVGRLA TLALRELSLD VAFLSSSSWD
VEHGVSTPVE AKVDVKRAAL AAATTSVLVA GSAKYGRFAR YRALRLDEID TIVTDDELPD
EAAARVGATG VTLVRAGVGA EAGGPTGDAA EAADATEAGG AAG
|
|---|
| |