| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3708 |
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| Symbol | |
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| ID | 8327898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4358375 |
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| End bp | 4359940 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944197 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003101437 |
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| Protein GI | 256377777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTCA CCAGCACCGC CGACCTGTGG TGGAAGAACG CGGTCGTCTA CTGCCTGGAC
GTGGAGACCT TCCACGACGG CAACGGCGAC GGCGTCGGCG ACTTCCGCGG CCTGATCCAG
AAGATCGACC ACCTGCACCG CCTGGGCGTG ACCTGCCTGT GGCTGATGCC GTTCTACCCG
ACCGCGAACC GCGACGACGG CTACGACATC ACCGACTACT ACTCGGTCGA CCCGCGCCTG
GGCACCCTCG GCGAGTTCGC CGAGCTCGTG CGCACCGCCC GCGACCGGGG CATCCGGGTC
ATCGCCGACC TGGTGGTCAA CCACACCTCC GACCAGCACC CGTGGTTCCA GGCCGCGCGC
AGCGACCCGG ACTCGCCCTA CCGCGACTGG TACGTGTGGG CCGACGAGCG CCCGCCGAAC
GCCGACGACG GCGTGGTCTT CCCCGACAAG GAGACCTCGC TGTGGGACTA CGACCGCAAG
GCCAAGCAGT ACTACCTGCA CCGGTTCTAC CGGCACCAGC CGGACCTGAA CGTGGCCAAC
CCGGACGTGC GCGACGAGAT CGCCCGCGTC ATGGGGTTCT GGATGCAGCT GGGCCTGTCC
GGCTTCCGGG TCGACGCGGT GCCGTTCCTG CTGGAGGCGC CCATCGAGGC GCTGCCGGAC
CCGCACGACT ACCTGCAGGA CCTGCGGGCG TTCCTGTCCC GCCGCGACGG CGAGGCGGTC
CTGCTGGGGG AGGTGAACGT GCCCTACAAC GACGCGCTGA GCTACTTCGG CAGCGCGGAG
GGCGTCGGGG ACGAGCTGAC GATGTGCTTC GACTTCGTCG GGATGCAGCA GATGTACCTC
TCGCTCGCCC GCCGGGACGC CTCGCCGCTC ACGCACGCGC TGCGCGAGCG CCCGGAGCCG
CCGCGCGACG CCCACTGGGC CACGGTGGTG CGCAACCACG ACGAGCTGAC CCTGGACAAG
CTGACCGAGC CCGAGCGGCA GGAGGTGTTC GCCGCGTTCG GGCCCGACCC GGACATGCAG
GTGTACGGGC GGGGGCTGCG TCGCAGGCTG CCCCCGATGC TGGAGGGCGA CGAGCGGCGG
GTGCGCATGG TGTACAGCCT GCTGTTCTCG CTGCCGGGCA CGCCGGTGCT GTTCTACGGC
GAGGAGATCG GCCTCGGCGA GGACCTGTCC CGCGAGGGGC GGATGGCGGT GCGGGTGCCG
ATGGACTGGG AGGCGGTCAG CGAGCAGCGG CGCGACTCCG GGTCGCTGCT GGCGTGGTTC
CGGCTGCTGG TGGAGCGGTA CCGGGAGTGC CCGGAGCTGG CGTGGGGCGC GCACCGGGTG
GTGGACACCG GTGAGGCGGC GGTGCTGGTG CAGCACAGCG AGGTGGACGG GCACGTGGTG
CTGACGGCGC ACAACCTGGC CGACCGCGAG GTGGAGCTCC AGGTGCCGGA CCTGGAGCCG
GGGCAGCGGC TGACGGACCT GCTGGTGGAC GGCACGGTGC AGGCCGACGA GGAGGGCGTG
GTGCGGTTGA CCCTGGAGCC GTACGGGTGC CGGTGGTTCC GCACGGACGT GGACCGGGTG
ACGTGA
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| Protein sequence | MRLTSTADLW WKNAVVYCLD VETFHDGNGD GVGDFRGLIQ KIDHLHRLGV TCLWLMPFYP
TANRDDGYDI TDYYSVDPRL GTLGEFAELV RTARDRGIRV IADLVVNHTS DQHPWFQAAR
SDPDSPYRDW YVWADERPPN ADDGVVFPDK ETSLWDYDRK AKQYYLHRFY RHQPDLNVAN
PDVRDEIARV MGFWMQLGLS GFRVDAVPFL LEAPIEALPD PHDYLQDLRA FLSRRDGEAV
LLGEVNVPYN DALSYFGSAE GVGDELTMCF DFVGMQQMYL SLARRDASPL THALRERPEP
PRDAHWATVV RNHDELTLDK LTEPERQEVF AAFGPDPDMQ VYGRGLRRRL PPMLEGDERR
VRMVYSLLFS LPGTPVLFYG EEIGLGEDLS REGRMAVRVP MDWEAVSEQR RDSGSLLAWF
RLLVERYREC PELAWGAHRV VDTGEAAVLV QHSEVDGHVV LTAHNLADRE VELQVPDLEP
GQRLTDLLVD GTVQADEEGV VRLTLEPYGC RWFRTDVDRV T
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