Gene Amir_3706 details

Gene Information

• Locus tag: Amir_3706
• ID: 8327896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 4357198
• End bp: 4357878
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644944195
• Product: response regulator receiver and unknown domain protein
• Protein accession: YP_003101435
• Protein GI: 256377775
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4565] Response regulator of citrate/malate metabolism

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGCGGG CGCTGGTCGT GGACGACGAC TTCGCGGTGG CCGCGGTGCA CCGGGGGTTC 
CTGGCGTCGC TGCCGGAGTT CGAGGTGGTG GGCGAGGCGC ACGACGGCGA CGCGGCGCTG 
CGGGCGGTGG ACGAGCTGCT GCCGGACCTG GTGCTGCTCG ACATCCACCT GCCGGACATG 
TCCGGGCTGG AGGTGCTGGC CAGGCTGCGG GCGCGCGTCG GGCCGCCGGT GGACGTGATC 
GCGGTGACGG CGGCGCGGGA GCGGGAGACG GTGCGGCAGG CGATGTCCAA GGGGGTGGAC 
CACTACCTGG TGAAGCCGTT CACGCGCACG GCGTTCCTGG ACCGGATGCG GGAGTACCTG 
GCGCGGCGGG TGGAGGTGCA GCGGCTGGGC GACTGGCTCG ACCAGGACGA GGTGGACCAG 
CTGATGCAGC ACCGGCCGGC GAACGTGCTG CCGAAGGGGC TGTCGGCGGT GACGCTGCGG 
CTGGTGACCG AGGCCCTGCG GGCGGCGGAG GGCGGCGCGG TCGCGGGGAA CATGTCGGCG 
CAGGAGGTGG GCGACCGGGC GGGGCTGTCG CGGGTGAGCG CGCGGCGGTA CCTGGAGCAC 
CTGGTGGCGG TGGGCAAGGC GGAGGTGCAA CCCCGGTACG GGGTGGCGAA CCGGCCCGCG 
CACGGGTACC GGTTGACGTG A 

 

Protein sequence

MVRALVVDDD FAVAAVHRGF LASLPEFEVV GEAHDGDAAL RAVDELLPDL VLLDIHLPDM 
SGLEVLARLR ARVGPPVDVI AVTAARERET VRQAMSKGVD HYLVKPFTRT AFLDRMREYL 
ARRVEVQRLG DWLDQDEVDQ LMQHRPANVL PKGLSAVTLR LVTEALRAAE GGAVAGNMSA 
QEVGDRAGLS RVSARRYLEH LVAVGKAEVQ PRYGVANRPA HGYRLT