| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3679 |
|---|
| Symbol | |
|---|
| ID | 8327869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4305580 |
|---|
| End bp | 4307388 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644944169 |
|---|
| Product | condensation domain protein |
|---|
| Protein accession | YP_003101409 |
|---|
| Protein GI | 256377749 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC CTGACCCGCG CGTCGCGCGG TTGTCCGACA CCAAGCAGGA GTTGCTGAAC
CTCTGGCTGG CCGACGGTCC CGCCGCGCGG TCCGCGCCGC GCACCGGCGC GGAGCGGATC
GTCACCGGCA TCTGGGGCGA GGTGCTCGAC CTCGACGAGG TCGGCCTCGA CGACGACTAC
TTCGCCCTGG GCGGGGACTC GGTGCACGCC ATCGTGATCG TGGCGAAGCT GGAGGCCGCA
GGGCTGCGGA TCTCCGCCCA GGAGCTGTTC AGCCTGGGCA CCGCGCGCGC CGTCGCGGAG
CGGGCGGGCG CGGAACAGGC GGGCGTGGGG TGGCAGGGCG CCGAACGGGC GGTCGCGGGC
CCGGTGGTCA CCGACCACCC GCTCAGCCCG ATGCAGGAGG GGATGCTCTA CCACTCCGTC
GGCGGCAGCA GCCCCGGCGC CTACGTGGTC CAGGCGTGCT GCTCGCTGAC CGGGGACCTG
GACCTCGACG CGTTCCGCGC GGCGTGGACC GCCGTGGTGG AGGCGACCCC CGCGCTGAGG
GCCTCGTTCG ACTGGGCCGA CGGCGCCCGG CCGCACCAGG TGGTCGCCGA GGCTGCCGTG
CCGGATGTCC AGGTCCTCGA CTGGCGCGAC CGCGACGACC GGGACACGGC GCTCGCCGAC
CACCTGGAGC AGGACCGCGA CCGCGGCTTC GACCTCGGAC GTGCCCCGCT GTTCCGGCTC
ACCCTGGTGC GCGAGTCCGA CCGGACCCAT CGGTGCGTGT GGACGCACCA CCACCTCGTC
CTGGACGGCT GGTCGCAGCA GTTGGTGCTC GCCGACGTCC TGGCCACCTA CGGGGCGCTG
GTCGCGGGCG TGGAACTCCA CCTGCCCCGG CGTCCCGGCA CGGCCGAGTA CCTGGCCTGG
CTGAACCGGC AGGACCGCGC CGCCGCCGAC GAGTTCTGGA ACCGGCAGTT CACCGGGCTG
ACGGGGGCGA CCAGGATCGC GCGGCCGGGC TGCGTGCGGG GCCAGGTCGT CGCGCGCCGC
GGTGGTGAGG TCGTGGTGAG CCTGCCCGAG GAGCGGACCG CGGAGCTGAG CGGGCTCTGC
CGAGGCAACG GCCTCACCAC GAGCACCGCC CTCTACGGGG CCTGGGCACT GCTGCTGTCG
GAGCTGTGCG GCGGTGACGA CGTCGTCTTC GGGGTCACGG TCTCCGGCCG TCCTCCGACC
CTGCCAGGAG CGACCGAGCT GATCGGCGTG CTCATCAACA CCTTGCCGCT GCGGGTGCGC
TGCGCCACGA GCGGGCCCGC CCTGCCCTGG CTGCGCGAGC TGCAGGACCG CCTGGCCGCG
ATGCGCGAGC ACGGGCACGT CCCGCTCTCC GGCATCACCC GCTCCGTCGG CCTGCACCAC
CGCGACACCC TGTTCGACAC GATCGTCGTG GTCGAGAACT TCCCCGTGAC GGCGACCGGG
AACGGCGCGG GACCGCTGGT GATCGGGGAC GTGCGCACCG TCGTCGACGA GGGCTACCCG
CTGGTGCTGG AGGTGGTCCC CGGCGGCCAG TTGCTGCTCC GAGCCCGCCA CGACCCGACC
CGGCTCGACG CCGAGGAGGT CGCGGCCCTG CTCGACGCGC TCCTCGCCTG CCTCGGCGCG
CTCATCGCCG ACCCGGAGCA GTCGCCGTCC CGGTTGCGGA CCCTGCTGGC GGGACACCTC
CGGCAGCACC GGGAACGGAC TTTCCACGCC CGCCAGGACA CGGCGGCCAA GAAGCTGGCC
ACCGCGCGGC GGCAGGCCAC GAGCACGCCC GGCCGAGCCG GGGTCGCGGA CACGGAGGAG
GACGCATGA
|
|---|
| Protein sequence | MTEPDPRVAR LSDTKQELLN LWLADGPAAR SAPRTGAERI VTGIWGEVLD LDEVGLDDDY
FALGGDSVHA IVIVAKLEAA GLRISAQELF SLGTARAVAE RAGAEQAGVG WQGAERAVAG
PVVTDHPLSP MQEGMLYHSV GGSSPGAYVV QACCSLTGDL DLDAFRAAWT AVVEATPALR
ASFDWADGAR PHQVVAEAAV PDVQVLDWRD RDDRDTALAD HLEQDRDRGF DLGRAPLFRL
TLVRESDRTH RCVWTHHHLV LDGWSQQLVL ADVLATYGAL VAGVELHLPR RPGTAEYLAW
LNRQDRAAAD EFWNRQFTGL TGATRIARPG CVRGQVVARR GGEVVVSLPE ERTAELSGLC
RGNGLTTSTA LYGAWALLLS ELCGGDDVVF GVTVSGRPPT LPGATELIGV LINTLPLRVR
CATSGPALPW LRELQDRLAA MREHGHVPLS GITRSVGLHH RDTLFDTIVV VENFPVTATG
NGAGPLVIGD VRTVVDEGYP LVLEVVPGGQ LLLRARHDPT RLDAEEVAAL LDALLACLGA
LIADPEQSPS RLRTLLAGHL RQHRERTFHA RQDTAAKKLA TARRQATSTP GRAGVADTEE
DA
|
|---|
| |