Gene Amir_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3650 
Symbol 
ID8327840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4263636 
End bp4265021 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content72% 
IMG OID644944141 
Producthypothetical protein 
Protein accessionYP_003101381 
Protein GI256377721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0942983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACCAC GTCGCAGCTC TGCCCCGAAG CACCAGCCGA ACCACCGCCT GGCGTGGGCC 
CGCCTGCAGC GGGGCTGGGG TCAGCGCGAA CTGGTGGAGC AGATCCGGCG CAGCATGGCG
AGCGCGGGAG AACCGGAGCC GGGACTCACC GAGGAAGCGG TCCGCCGTTG GGAGGCGGGA
GACCGCAAAC CGGAGCCCAG GTACAAGAAG CACCTGGTCC TGGTGTTCGG CGAGTCGGCG
GAGGACCTGG GGCTGCTGTC CTCCGAGGAA CTGGCGATCA GTCCCGTGCC CGTTCCCCCG
GCGGGAGCTA CGGTGGACGC ACGGATGATC GAAGCCGTGG TGAGGCAGGT GATGGCGGTG
CTGCTCGGTG ACGACGGCCG GTTCGGCCGA GACCTCTTCC TGAAGGGCTT GCTGGGCACG
AGCCTGAGCG CCCTCCTCCC GCTCGACGAG GGGGTGGCGG CTGCCGCCGA GTCGCTGGCC
AGACCGCAGC GAACCCGCCT GGACGAGCGC TCCGTGGACG CCTACGCAGC GATCACCACG
TCTCAGCAAG CCCTCTACTG GAGCACTCCA CCCACCGCAC TCCTGGACGC GGCCACGGCC
CACGCGCGGC TCGGGGCGGT GCTGCTCCGC GGTGCCTTCG ACACCGATCC GCTGTTCACC
CGGCTGGCGG GTGCCGTCGC GCAGTCCGCA CTGCTGGCGG CCCGGCTCTG CTTCTTCGAC
CTGTCCAGGG AAAAAGCTTC CGAGCAGTTC TTCCAACTGG CGCAGGACGC GGTGTCGCAG
TCCCGCGACC ACCACCTGTC GGCCGTCGTC CTGGCGCACC GCGCGTTCGT CCCCGGTTTC
GCCGGGCGGG AGCAGCAGGC GCGGAACTTC TTGAAAGCAG CGCACGCGCA CATCCGCCAG
GGCGCCGGGC CGCTCACCCG CGCCTGGTTG CACTGCGTGG ACGCGGAGAT CTCCGCACGG
GTCGGCAGGC AGGACGCGAG CATCGGGAAG ATCGGCGCGG CGGAGGACGC GTTGAGCCGG
GAGGGCACCG ATCCGCTCTG GCTCGATTTC TTCGACGCGT CACGGCTGTC CGGCTTCGCG
GGCAACGCGC TGCTGCTGGC AGGTGACCAC GCAGGAGCGG CGACCCGCCT GCGGGAAGCG
CTGGACGGGC TCGCCGAGGA CGCGACCAAG CAGCGGACCG TGCTGCTGCT CGACCTGGCC
GCCGCCCAGG CGCCCGGTGA CGCGGACGAG GCGTTCGGCA CGGCCCGCCA AGCGTGCGCC
CTGCTGGAGC ACGACCGCTA CGCGGCGGCC GTGCAGCGGC TCCCCCAGGT GCACACCGCC
CTGAGCGGGA CCCCCTACGC CAAGCAGTTC GGCGAGGAGG TCCGCTCCCT GACGGGCGGT
GCCTGA
 
Protein sequence
MGPRRSSAPK HQPNHRLAWA RLQRGWGQRE LVEQIRRSMA SAGEPEPGLT EEAVRRWEAG 
DRKPEPRYKK HLVLVFGESA EDLGLLSSEE LAISPVPVPP AGATVDARMI EAVVRQVMAV
LLGDDGRFGR DLFLKGLLGT SLSALLPLDE GVAAAAESLA RPQRTRLDER SVDAYAAITT
SQQALYWSTP PTALLDAATA HARLGAVLLR GAFDTDPLFT RLAGAVAQSA LLAARLCFFD
LSREKASEQF FQLAQDAVSQ SRDHHLSAVV LAHRAFVPGF AGREQQARNF LKAAHAHIRQ
GAGPLTRAWL HCVDAEISAR VGRQDASIGK IGAAEDALSR EGTDPLWLDF FDASRLSGFA
GNALLLAGDH AGAATRLREA LDGLAEDATK QRTVLLLDLA AAQAPGDADE AFGTARQACA
LLEHDRYAAA VQRLPQVHTA LSGTPYAKQF GEEVRSLTGG A