Gene Amir_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3609 
Symbol 
ID8327799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4222273 
End bp4222959 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content77% 
IMG OID644944104 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101344 
Protein GI256377684 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTGC GCGAGCGCAG GCGGGCCGCC GCCACCCGCG AGATCCTGGA CGCGGCCAAG 
GCCCGGATGT CCGAGCACGG GCCCGCCGGG CTGGCGCTGC GGGCGGTGGC CCGCGACCTG 
GACATGACCG TGCAGGCCCT CTACCACTAC TTCCCCAGCC GGGACGACCT GCTGACCGCG 
CTGATCGTGG AGGCGTACGA GGACCTGGCG GCGGCCGTGC GGACCGCGCT GGACGCCGCG 
CCGCCGGAGC CGTTCCCGGC CGTGGCGGAG GCGTTCCGGA CGTGGGCGAT CGAGCACCGG 
GCCCAGTTCC AGCTGATCTA CGGCACTCCC CTGCCGCACT ACCGCGCCCC GCACGAGGGC 
CCGACCACCG AGGCCGCCAG GAAGGTCACG GCGGTCCTGC GCGCCGCCCT GTTCGACGGC 
TGCGCCGAGG AGGCGCTGGC CCGCGCGGAC GCGCCCGAGC TGACCCCGGA GCTGCGCGCC 
CGCCTCGCCG AACTGCCCCC GGAGGCCAGG GGCGAGCTGC CGCCGCCCGC CGCCGCGCTG 
TTCCTGGACG CGTGGGCCAG GCTGCACGGC CTGGTGGTGC TGGAGGCGTT CGGCCACTTC 
GACTTCCTGG CCCCGCTGCA GGCGGAGGTG TTCCGGGGAG CGGTGCGGTC GCTGGCGGCC 
GACGTGCGGC GGCGGGTTCC GGGCTGA
 
Protein sequence
MSLRERRRAA ATREILDAAK ARMSEHGPAG LALRAVARDL DMTVQALYHY FPSRDDLLTA 
LIVEAYEDLA AAVRTALDAA PPEPFPAVAE AFRTWAIEHR AQFQLIYGTP LPHYRAPHEG 
PTTEAARKVT AVLRAALFDG CAEEALARAD APELTPELRA RLAELPPEAR GELPPPAAAL 
FLDAWARLHG LVVLEAFGHF DFLAPLQAEV FRGAVRSLAA DVRRRVPG