| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3558 |
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| Symbol | |
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| ID | 8327748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4132426 |
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| End bp | 4132929 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644944055 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003101295 |
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| Protein GI | 256377635 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0363332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGTCG ACTACGACCA GTTCGTGACC GATCGCCTCG ACCAGCTCCT GCGCTACGCC
ACCGCGCTCA CCTGCGACAA GCACCTGGCG CAGGACATCG TGCAGGACGT GCTGCTGCGG
GCGAGGCAGA AGTGGGCGCG GATCGGCGCG CTGGAGGTGC CCTACCTGTA CCTCAAGCGC
ATGGTCACCA ACGACTACCT GTCGTGGCGA CGCCGCCGCG CGGCGCGCGA GGTGCTCACC
GGGCACGGCG GGTTCGACGA GGTGGGGCCG GTGGTGGCCG ACCACGCCGA GCGGCACGCG
GAGCGCGACG CCATGCGCGC CCTGATCGCC GCGCTGCCGC GCAAGCAGCG GGCGGCGGTC
GTGCTGCGCT ACTACGAGGA CAGCAGCGAC GAGGAGATCG CGTCGGTGCT GAAGTGCTCG
GTGGGCACGG TGCGCAGCAA CATCTCCCGC GCGCTGGCGA AGCTGCGGGT CCAGCGGAGC
GAACAGCCGG AGGTGCTGCG ATGA
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| Protein sequence | MQVDYDQFVT DRLDQLLRYA TALTCDKHLA QDIVQDVLLR ARQKWARIGA LEVPYLYLKR
MVTNDYLSWR RRRAAREVLT GHGGFDEVGP VVADHAERHA ERDAMRALIA ALPRKQRAAV
VLRYYEDSSD EEIASVLKCS VGTVRSNISR ALAKLRVQRS EQPEVLR
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