| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3542 |
|---|
| Symbol | |
|---|
| ID | 8327732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 4115642 |
|---|
| End bp | 4116790 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644944040 |
|---|
| Product | Saccharopine dehydrogenase |
|---|
| Protein accession | YP_003101280 |
|---|
| Protein GI | 256377620 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC ACGCCACCCC CGCATCCGGC CGGGTCCACT GGATCGGCGT CGGCCTGTCC
ACCGGCGACG GCCTGCGCCA GCTCGCCCGC GCCGCCCGCG AGGTCCTCGT CTGGGGCCGC
ACCACCGCCC GCGCCGACCA GCGCGTCGCC GAACTCGGCC TCACCGGCGA GGTGCGGACC
CGCGCGTACA GCACCGAGGC GCTCGCCGCC GAGGTCGGGC CCGGCGACGT CGTGGTGTCC
ATGCTGCCCG CGCCCGAGCA CCCCGCCGTG CTGCGCGTCT GCCTGGACAA CGGCGCCCAC
TTCGCCAGCT CCAGCTACCT CTCCCCCGAG GTCGCCGAGC TCGCCGCCGA CGCCGCCTCG
CGCGGCCTGG TCGTGCTCAC CGAGGCCGGG CTCGACCCCG GCTCCGACCA CCTGCTCGCC
CACGACCTGC TCGACCGCGC CGCCGCCGAG CTGGGCGCCG ACACCCCCGC GTCGATCACG
TTCACCTCGT ACTGCGGCGG CCTGCCCGCC GTGCCCAACG AGTTCCGCTA CCGCTTCAGC
TGGGCCCCGC GCAGCGTCCT GACCGCCCTG CTCGGCCGCG CCCGGTACGT CGAGGGCGGC
GTCGAGCGGG TGGCCGAGCG GCCGTGGGAG GCGGTTCGGC CGCACGTGCT GGGCGGCGAG
GAGTTCGAGG TCTACCCCAA CCGGGACAGC GTGCCGTACG TGCGCGCGTA CGGCGTGCCC
GACGCGTGGC GGCCCGAGGT GTTCATCCGG GGCACGATCC GCAACAGCGG CTGGAGCGCG
GCGTGGGAGC CGGTGTTCGC CGAGCTGCGC GCCGCCGACG ACGCCCGGCT GACCGCGCTG
GCGAACGAGC TGGCCGAGCG CTACCCCACC ACCCCGGCCG ACCGGGACCG GGTGGTGCTG
GCCGTGGCGC TTGAGGTGCG GGCCGACGAC GGGCGGGAGT GGCGCGGGGA GCACGTGCTC
GACGTGGTCG GCGACGACAC CGACAGCGCG ATGGCCCGCA CCGTGTCCAC GACCCTGGCG
CGCGGCGTGC TCGACGTCCT GGAGGGCCGC ACGGCCGCCG GGACGCACAC CGCGACCACC
GACCCGGAGG CCGCGCGCCG CTGGCTCGGG TACCTGGCCG AGCACGGGGT GCGCTTCACC
TCCCGCTGA
|
|---|
| Protein sequence | MPEHATPASG RVHWIGVGLS TGDGLRQLAR AAREVLVWGR TTARADQRVA ELGLTGEVRT
RAYSTEALAA EVGPGDVVVS MLPAPEHPAV LRVCLDNGAH FASSSYLSPE VAELAADAAS
RGLVVLTEAG LDPGSDHLLA HDLLDRAAAE LGADTPASIT FTSYCGGLPA VPNEFRYRFS
WAPRSVLTAL LGRARYVEGG VERVAERPWE AVRPHVLGGE EFEVYPNRDS VPYVRAYGVP
DAWRPEVFIR GTIRNSGWSA AWEPVFAELR AADDARLTAL ANELAERYPT TPADRDRVVL
AVALEVRADD GREWRGEHVL DVVGDDTDSA MARTVSTTLA RGVLDVLEGR TAAGTHTATT
DPEAARRWLG YLAEHGVRFT SR
|
|---|
| |