Gene Amir_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3534 
Symbol 
ID8327724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4107893 
End bp4108639 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content75% 
IMG OID644944032 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003101272 
Protein GI256377612 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.40867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGGAG GAACATCCCA GCCCGGCCGG GGAGTGATGG CCCGCGCGCT GGACGTGCTC 
AACGCCTTCG AGGGGCACCG GGACGGCCTG GTGCTGGCCG ACCTGGCGCG GATCAGCGGG
CTGCCGCTGA CCACGACGCA CCGGCTGGCC AGCGACCTGG TGGCGCAGGA GGTGCTGGAG
CGGCTGCCCG ACCGCAGGTA CGTGGTGGGC CGCAAGCTGT GGCAGCTCGG GCTGCTCGCG
CGCGTGCAGG GCGGGCTGCG GGACGTGGCG CTGCCGTTCC TCCAGGACCT CTACGAGGCC
ACGCGCGAGA ACGTGCACCT GGCGGTGCGC GACGGCGACG AGGCGCTGTA CCTGGAGCGG
CTGCACGGGC ACTCGTCGGT GCCGGTGGTG AGCAGACCCG GCGGGCACCT GCCGCTGCAC
GCCACCGGCG TGGGCAAGGT GCTGCTGGCG CACGCGCCGC AACCGGTGGT CGCCGAGGCG
GTGCAGTGCG CGGAGAAGGT GACGCCGTAC ACGATCACCG AGCCGGGCAG GCTGCTGCGC
GAGCTGGCCG AGGTGCGCCG CAGGGGCTTC GCGCGCACGG TGCAGGAGAT GACGCTGGGC
ACCTGCTCGG TGGCGGTCCC GGTGCTCGAC CGCCGGGGTG ACGTGGTGGC CGCGCTGGGC
GTGGTGACCG CGACCCGCCG CGAACCCGCC CGGCTGGTGA CGGCGCTGCG GATCGCGGCC
GGGGGCATCA GCCGCGCGCT GCGCTGA
 
Protein sequence
MAGGTSQPGR GVMARALDVL NAFEGHRDGL VLADLARISG LPLTTTHRLA SDLVAQEVLE 
RLPDRRYVVG RKLWQLGLLA RVQGGLRDVA LPFLQDLYEA TRENVHLAVR DGDEALYLER
LHGHSSVPVV SRPGGHLPLH ATGVGKVLLA HAPQPVVAEA VQCAEKVTPY TITEPGRLLR
ELAEVRRRGF ARTVQEMTLG TCSVAVPVLD RRGDVVAALG VVTATRREPA RLVTALRIAA
GGISRALR