Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3534 |
Symbol | |
ID | 8327724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4107893 |
End bp | 4108639 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944032 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003101272 |
Protein GI | 256377612 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.40867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGGAG GAACATCCCA GCCCGGCCGG GGAGTGATGG CCCGCGCGCT GGACGTGCTC AACGCCTTCG AGGGGCACCG GGACGGCCTG GTGCTGGCCG ACCTGGCGCG GATCAGCGGG CTGCCGCTGA CCACGACGCA CCGGCTGGCC AGCGACCTGG TGGCGCAGGA GGTGCTGGAG CGGCTGCCCG ACCGCAGGTA CGTGGTGGGC CGCAAGCTGT GGCAGCTCGG GCTGCTCGCG CGCGTGCAGG GCGGGCTGCG GGACGTGGCG CTGCCGTTCC TCCAGGACCT CTACGAGGCC ACGCGCGAGA ACGTGCACCT GGCGGTGCGC GACGGCGACG AGGCGCTGTA CCTGGAGCGG CTGCACGGGC ACTCGTCGGT GCCGGTGGTG AGCAGACCCG GCGGGCACCT GCCGCTGCAC GCCACCGGCG TGGGCAAGGT GCTGCTGGCG CACGCGCCGC AACCGGTGGT CGCCGAGGCG GTGCAGTGCG CGGAGAAGGT GACGCCGTAC ACGATCACCG AGCCGGGCAG GCTGCTGCGC GAGCTGGCCG AGGTGCGCCG CAGGGGCTTC GCGCGCACGG TGCAGGAGAT GACGCTGGGC ACCTGCTCGG TGGCGGTCCC GGTGCTCGAC CGCCGGGGTG ACGTGGTGGC CGCGCTGGGC GTGGTGACCG CGACCCGCCG CGAACCCGCC CGGCTGGTGA CGGCGCTGCG GATCGCGGCC GGGGGCATCA GCCGCGCGCT GCGCTGA
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Protein sequence | MAGGTSQPGR GVMARALDVL NAFEGHRDGL VLADLARISG LPLTTTHRLA SDLVAQEVLE RLPDRRYVVG RKLWQLGLLA RVQGGLRDVA LPFLQDLYEA TRENVHLAVR DGDEALYLER LHGHSSVPVV SRPGGHLPLH ATGVGKVLLA HAPQPVVAEA VQCAEKVTPY TITEPGRLLR ELAEVRRRGF ARTVQEMTLG TCSVAVPVLD RRGDVVAALG VVTATRREPA RLVTALRIAA GGISRALR
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