Gene Amir_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3530 
Symbol 
ID8327720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4099768 
End bp4100571 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID644944028 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101268 
Protein GI256377608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0209016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTTGT ACGCTGGACA GGGTGATGCT CGGCGGTCCC TGTCGCTGCT GTGGCGGGAG 
GACACCGGTG ACCAGGTGAA ACCGGGGCCG AAGCAGGGGC TGACGGTCGA CTCGATCGTG
GACGCCGGGA TCGCGGTGGC CGACGACGGC GGCATGGAGG CGCTGTCCAT GCGGGCGGTG
GGCGAGCGGC TCGGGCGCAC GGCGATGGCG CTCTACACGT ACGTGCCCAA CAAGGCCGAG
CTGGTGGACC TGATGTACGA CCGGGTGCTG GCGGAGCTGC CAGGGCGGTA CGACCTGGAC
GACGGGTGGC GGCCCGCGCT GGGGGAGTGG GCGTGCGACA CCAGGGCGTT CTACCTGTGG
CACCCGTGGG TGCTGCGCGT CTCGCAGGCG CGGCCGGTGC TCGGGCCGAA CGAGTTCGCG
TCGCTGGAGA CGCTGGTGAC GATCCTGCGG GAGACCGGGA TCGGGCGGGG CGGGCTGCGC
GGGATCGTGG GGGCGCTGAC CCAGTTCGTG CGCGGGTCGG CGCAGGTCAC CGCGGACACG
CGGGGGGCGG CGAAGGCGAC CGGGATCGGC GACGAGGAGT GGTGGTACGG GCGGGCGCCG
CTGCTGGACG TGTACGACCT GAGCAACCGG TTCCCGATGG TGGTGTGGGT GAACGAGGAC
CCGCCGCCGC CGGTCGAGCT CTCCGGCGAC GGGCCGCCGG AGGGGGACGG GTACCTGGAG
CGGGAGGCGT CGCTGAGCTT CGCGGCGGGG TTGGAGGTGC TGCTGGACGG GATCGAGGTC
GCGTCGGCGC GGGCGCGGGG GTGA
 
Protein sequence
MVLYAGQGDA RRSLSLLWRE DTGDQVKPGP KQGLTVDSIV DAGIAVADDG GMEALSMRAV 
GERLGRTAMA LYTYVPNKAE LVDLMYDRVL AELPGRYDLD DGWRPALGEW ACDTRAFYLW
HPWVLRVSQA RPVLGPNEFA SLETLVTILR ETGIGRGGLR GIVGALTQFV RGSAQVTADT
RGAAKATGIG DEEWWYGRAP LLDVYDLSNR FPMVVWVNED PPPPVELSGD GPPEGDGYLE
REASLSFAAG LEVLLDGIEV ASARARG