| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3518 |
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| Symbol | |
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| ID | 8327708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4085194 |
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| End bp | 4089114 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644944016 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003101256 |
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| Protein GI | 256377596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGC CGTCTTTCGC CGACCTGCAG CAACGCCTGC CCCAGCTCAT GACTCGGGAC
CAGCGCCGCC TGCGCCGCCG CCTCGACGGC GTCCGCAAGA TGCGCGACGA GCGGGCACGC
GCGGGGGTTG CCGCCGAGAT CGCAGCCGAG TTCGACCAGG CCGAGCTGAG GGTGGCGCTG
CGCCGCGAGG CCCTGCCCAC GATCACCTAC CCGGCCGAGC TGCCGGTGAG CGCGCACAAG
GACGAGATCG CCGCGCTCAT CCGCGACCAC CAGGTGGTGG TCGTGGCCGG TGAGACCGGG
TCGGGCAAGA CCACGCAGCT GCCCAAGATC TGCCTGGAGC TGGGCCGGGG CGTCCTCGGC
CAGATCGGGC ACACCCAGCC GCGCAGGCTC GCCGCCCGCA CCGTCGCCGA GCGCGTCGCC
GAGGAGCTGG GCACCGAGCT GGGCGCGGCG GTCGGCTACA AGGTCCGGTT CACCGACCAG
TCCGGCGACG ACACGCTGGT CAAGCTGATG ACCGACGGCA TCCTGCTCGC CGAGCTCCAG
ACCGACCGGA TGCTCTCCCG CTACGACACG ATCATCATCG ACGAGGCGCA CGAGCGCAGC
CTCAACGTCG ACTTCCTCCT CGGCTACCTC AAGCAGCTGC TCCCCCAGCG CCCGGACCTG
AAGGTCGTCA TCACCTCGGC GACCATCGAC CCGCAGCGCT TCTCCCGGCA CTTCTCCGAC
GCGCCCGTCA TCGAGGTCTC CGGCCGCACC TACCCGGTCG AGGTGCGCTA CCGGCCGCTG
GTCGACCCGG AGGACCCCGA GGCCGACCCG GACCGCGACC AGACCAGGGG CATCTGCGAC
GCCGTGCGCG AGCTCCAGGC CGAGGGGCCC GGCGACGTGC TGGTGTTCCT GTCCGGCGAG
CGGGAGATCC GCGACACCGC CGACGCCCTG AACGCGCTCA AGCTGCGCGA CACCGAGGTG
CTGCCGCTGT TCGCGCGGCT GTCGTTCGCC GAGCAGCACC GGGTGTTCCA GCCGCACCGG
GGCAGGCGGG TCGTGCTGGC CACGAACGTG GCCGAGACCT CGCTGACCGT GCCCGGCATC
AAGTACGTGA TCGACCCCGG CACCGCCCGC GTCTCCCGCT ACAGCCACCG GCTCAAGGTG
CAGCGCCTGC CCATCGAACC GGTGTCGCAG GCCTCGGCCA ACCAGCGCAA GGGGCGCTGC
GGCCGGGTGT CCGAGGGCAT CTGCGTGCGG CTGTACTCCG AGGACGACTT CCTGGCGCGC
CCGGAGTTCA CCGACCCGGA GATCCTGCGC ACCAACCTGG CGTCGGTCAT CCTGCAGATG
ACCTCGATCG GGCTCGGCGA CATCGCCGGG TTCCCGTTCA TCGACCCGCC GGAGTCGCGC
AACATCGCCG ACGGCGTGCA GCTGCTCCAG GAGCTGGGGG CGCTGGCGCC CACGCCGGGG
CGGGAGCTGA CGCCGCTGGG GCGCAAGCTC GCGCAGCTGC CGATCGACCC GAGGCTCGCG
CGGATGGTCG TGGAGGCCGA CCGCAACGGG TGCGTGCGCG AGGTCATGGT GATCGCGGCG
GCGCTGTCCA TCCAGGACCC GCGCGAGCGG CCCGCCGACA AGCAGCAGGC CGCCGACGAG
CAGCACGCCC GGTTCAAGGA CGCGGGGTCG GACTTCACCT CGTACCTGAC GCTGTGGGAG
TACCTGAAGG AGCAGCAGAA GGAGCGCTCC TCGAACCAGT TCCGCAGGAT GTGCCGCGCG
GAGTTCCTGA ACTACCTGCG GGTGCGCGAG TGGCAGGACG TGTACGCGCA GCTGCGGCAG
GTCGCCAAGA CGCTCGGGGT GCACGTCAAC ACCGAGCCGG GCGAGTCGCG CAACATCCAC
GTGAGCCTGC TGGCGGGGCT GCTCTCGCAC ATCGGGCTCA AGGACGTGCC CAAGCGGGAG
CAGGGGAAGA AGGAGCAGGG CAGGCGGCAG CTCGCCGAGT TCCTGGGGGC GCGGGGGGCG
CGGTTCGCGG TGTTCCCCGG CTCGGCGCTG AGCAAGCAGC CGCCGCAGTG GGTCATGGCC
GCCGAGCTGG TGGAGACCTC CCGGCTGTGG GGGCGCACGG TCGCGAAGAT CGAGCCGGAG
TGGGCGGAGC GGCTGGCCGA GCACCTGGTC AAGCGCACCT ACAGCGAGCC CCGGTGGGAC
GCCAAGCGCG GCGCGGTCGT GGCGAGCGAG AAGGTGACCC TGTACGGGGT GCCGATCGTG
GCCGCCCGGC GGGTGAACTA CGGGCGGATC GACCCCGAGC TGTCGCGGGA GCTGTTCATC
CGGCACGCGC TGGTGCAGGG GGAGTGGAGC ACGCACCACG CGTTCTACGC GCGCAACCAG
GAGCTGCTGG CCGAGGTCGC GGAGCTGGAG AACCGGGCGC GGCGGCGGGA CATCGTGGTC
GACGAGGAGA CGATCTTCGA CTTCTACGCC GAGCGGGTCC CGGCGGACGT GGTGTCGGCG
CGGCACTTCG ACTCGTGGTG GAAGAAGGCG CGGCACGAGG ACGCCGAGCT GTTGACGTTC
AGCAAGAAGA TGCTGGTCAA CGACGTGGCG AAGGTGGAGC CCGAGGCCTA CCCGGACCAG
ATGGACCGGG GTGGGCTGAC GTTCTCGCTG TCCTACCGGT TCGAGCCGGG GGTCGGCGGG
GACGGCGTGA CGGTCCGGTT GCCGCTGCCC GCGCTGACGA AGGTCCCGGA CGACGCGCTG
TCGTGGCAGA TCCCCGGCCT GCGGACCGAG CTGGTGGTGG CGCTGATCCG GTCGCTGCCC
AAGCCGGTGC GGCGCAACTT CGTGCCGGTG CCGGACGTGG CGGCGGCGGC GCTGTCGCGG
ATCAAGGTGG ACGAGGCGCT GCTGCCCGCG CTGGAGCGGG AGCTGCGGGC GCTCACCGGG
GTCGTGGTGC CGCGCGAGGA GTGGAACCTC GACCAGGTCC CCGACCACCT GCGGTTGACC
TTCCAGGTGG TCGGCGAGGC GGGCGAGGAG CTGGCCGTCG GCAAGGACCC GGCGGCGCTG
AAGCTGCGGC TCAAGCAGCG GCTGCGGGCC AGCCTGGCCG AGGCCGCGGG GAGCCTGGCG
CGCACCGGGG TGGTGCGCTG GGACTTCGGC GACCTGCCCC GCGCGGTGCG GCGCGAGCGG
TCCGGGATCG TGGTCACCGC GTACCCGGCG CTGGTGGACA AGGGGACCAG CGCGGCCGTG
GAGATCCTGG ACACCCCAGG GCGGCAGGCG CACGCCATGC GGCTGGGGAC CCGGCGGTTG
ATCACGCTGA ACGTGCCCTC GCCGGTGAAG CTGCTCCAGC GCGGGCTGAC CAACTCGGAG
AAGCTGACGC TGACCCGCAA CCCGCACGGC GGGGTCGCCC CGCTGCTGGC GGACTGCATC
GCGGCGGCCG TGGACAAGCT GGTGGCCGAC GCGGGCGGGC CGGTGTGGAA GCAGGACGCC
TTCGCCGCGC TGACCGAGAA GGTCCGGGTC GGGTTGGGCG AGGCGGTCTT CGAGGTCGTC
GGGCGGGTCC GCAAGGTCCT GGACGCGGCC CAGGAGGTCG AGCTGGCCAT CGGGGCGGTG
CGCGGGCCGG GGGTCGAGGA GTCGCTGGCC GACGCGCGGG CCCAGCTGAG CGGGCTGGTG
CACGCCGGGT TCGTCGCCGA GGCCGGGGCC GCCCGGTTGG ACGACGTGGT GCGGTACCTG
AAGGGCATCG CGGTCCGGGT CGAGAAGCTC GGGCGGGACG TGCGGCGGGA CCAGGAGTGG
ATGGACCGGG TGCACGCCGT GCACGCCGAG TACCGGGACC TGCGGGCCAA GCTGCCCGCC
GACGAGCCCC AGCCGGGGCT GGACGAGGTC CGGTGGATGA TCGAGGAGCT GCGGGTGAGC
TACTTCGCGC AGACCATCGG GGCCCGGTAC ACGGTGTCGG ACAAGCGGAT CTTCAAGGCG
CTGGACGCGG TTCCCCGGTG A
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| Protein sequence | MNTPSFADLQ QRLPQLMTRD QRRLRRRLDG VRKMRDERAR AGVAAEIAAE FDQAELRVAL
RREALPTITY PAELPVSAHK DEIAALIRDH QVVVVAGETG SGKTTQLPKI CLELGRGVLG
QIGHTQPRRL AARTVAERVA EELGTELGAA VGYKVRFTDQ SGDDTLVKLM TDGILLAELQ
TDRMLSRYDT IIIDEAHERS LNVDFLLGYL KQLLPQRPDL KVVITSATID PQRFSRHFSD
APVIEVSGRT YPVEVRYRPL VDPEDPEADP DRDQTRGICD AVRELQAEGP GDVLVFLSGE
REIRDTADAL NALKLRDTEV LPLFARLSFA EQHRVFQPHR GRRVVLATNV AETSLTVPGI
KYVIDPGTAR VSRYSHRLKV QRLPIEPVSQ ASANQRKGRC GRVSEGICVR LYSEDDFLAR
PEFTDPEILR TNLASVILQM TSIGLGDIAG FPFIDPPESR NIADGVQLLQ ELGALAPTPG
RELTPLGRKL AQLPIDPRLA RMVVEADRNG CVREVMVIAA ALSIQDPRER PADKQQAADE
QHARFKDAGS DFTSYLTLWE YLKEQQKERS SNQFRRMCRA EFLNYLRVRE WQDVYAQLRQ
VAKTLGVHVN TEPGESRNIH VSLLAGLLSH IGLKDVPKRE QGKKEQGRRQ LAEFLGARGA
RFAVFPGSAL SKQPPQWVMA AELVETSRLW GRTVAKIEPE WAERLAEHLV KRTYSEPRWD
AKRGAVVASE KVTLYGVPIV AARRVNYGRI DPELSRELFI RHALVQGEWS THHAFYARNQ
ELLAEVAELE NRARRRDIVV DEETIFDFYA ERVPADVVSA RHFDSWWKKA RHEDAELLTF
SKKMLVNDVA KVEPEAYPDQ MDRGGLTFSL SYRFEPGVGG DGVTVRLPLP ALTKVPDDAL
SWQIPGLRTE LVVALIRSLP KPVRRNFVPV PDVAAAALSR IKVDEALLPA LERELRALTG
VVVPREEWNL DQVPDHLRLT FQVVGEAGEE LAVGKDPAAL KLRLKQRLRA SLAEAAGSLA
RTGVVRWDFG DLPRAVRRER SGIVVTAYPA LVDKGTSAAV EILDTPGRQA HAMRLGTRRL
ITLNVPSPVK LLQRGLTNSE KLTLTRNPHG GVAPLLADCI AAAVDKLVAD AGGPVWKQDA
FAALTEKVRV GLGEAVFEVV GRVRKVLDAA QEVELAIGAV RGPGVEESLA DARAQLSGLV
HAGFVAEAGA ARLDDVVRYL KGIAVRVEKL GRDVRRDQEW MDRVHAVHAE YRDLRAKLPA
DEPQPGLDEV RWMIEELRVS YFAQTIGARY TVSDKRIFKA LDAVPR
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