Gene Amir_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3493 
Symbol 
ID8327683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4057749 
End bp4058150 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content73% 
IMG OID644943993 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003101233 
Protein GI256377573 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGTGG AACGAACGGC CGTCAACCCG ACGACCTGGT CGGTCGGCAT GGGCTTCAAC 
CAGGGCGAGG TGGTCTCCGG GCAGTCCCGG ACCCTCTACT GCTCCGGGCA GACCGCGACC
GACGCCGACG GGGCGCCGCG GCACGCCGGT GACATGGCGG CCCAGCTGGC GCTGAGCCTG
GACAACCTGG AGGCGGTTCT CGGCGGGGCG GGCATGACGC TGGCGAACCT CGTCCGGCTG
AACGTGCACA CCACCGACGT GGACCTGCTC TTCCAGCACT ACGGGGTGCT GGCGGCCCGG
CTCGGCGCGG CCCAGGTCGC GCCGACGACC ACCATGCTGG GCGTCACCCG GCTGGCGCTG
GCGCCGCTGA TGGTGGAGCT GGAGGGCACC GCCGTCGCCT GA
 
Protein sequence
MAVERTAVNP TTWSVGMGFN QGEVVSGQSR TLYCSGQTAT DADGAPRHAG DMAAQLALSL 
DNLEAVLGGA GMTLANLVRL NVHTTDVDLL FQHYGVLAAR LGAAQVAPTT TMLGVTRLAL
APLMVELEGT AVA