Gene Amir_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3472 
Symbol 
ID8327662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4036682 
End bp4037923 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content74% 
IMG OID644943972 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003101212 
Protein GI256377552 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCACGA CACCGGCCGC CCTGGCGGTC CTGATCGCCC TGCTACCCGC GTTGCCCGCC 
TGCTCCGCCG CCCCGGCCGA CGGCGGCGAG GTCCTCACCG TCGTCGGCTG GAAGGGCGGC
GGCGGCGAGG AGGCCCGATT ACCCGAGCTG AACGCGGCCT TCGAGCGGGC CCACCCCGGC
GTGCGGGTCG AGCACCACTA CGTCGGGCCC GGCAACTACG AGACGTACAA CAACCCCAAG
CTCGCGTCCG GCACCGCCGC CGACGTGATC ATGGTCGACA AGGCCAAGAC GCGCACCTGG
ACCGACCAGG GCTACCTCGC CGACCTGTCC GACCAGCCCT GGGTGCCCGC GGTCCACCCG
GAGCTGGCGC CGTTCACCAC GGTCGACGGG CGCACCCGCC AGTTCACCCA GGAGAACATC
GGCATCGGCC TGTACGCGAA CCTCGACCTG CTGGCCTCGG CCGGGATCAC CGAGGTCCCC
CGCGACTGGC CCACCCTGCT CGCCACGCTC GACACCCTGC GCGAGAAGGG CAAACCCGGC
CTGCTGGTGC CCAACAAGGG CGGTTGGGGC GGGGTGCAGC TCGCGCTCGC GCTGGCCGTG
AACCGGCTCG CCCCGACCTG GAGCGCCGAC TACAACACCG GCCGCGCCCG CTTCGGCCCG
GACTGGGCGC CGGTCGTGGA CGAGCTCAAG CGCGCGGTCG CCTCCGGCGC GGTCGACGGC
AGGCTCATGC TCGGCCTGGA CGCCTGGTCG GACGCGCTCA CCGAGTTCAA GGCGGGCCGC
TGGGCGTTCC TCATCCAGGG CGCGTGGAAG CTCGCCGACT TCCGCGCCGA CCTCGGCTTC
CGCTTCTCCC TGAGCCCCAT CCCCGCGGGC CCGGCCGGGA GCGAGCCGGT GGCAGTGACG
TTCGTGGGCA CCGGCTGGGC CGTCAACGCG GACGCCCAGC GCCCCGACCT GGCCCGCGAG
TACGTGAAGT TCATGGCCGA ACCCGGCAAC GCCCGCCTGT ACTGCGAGGC CGAGGGCGCG
TTCTCCACCC TCGTCGGCGG GACCACGACC CTGCCCGCCG AGGCGTCCGC GCTGGTGGCG
GCCTTCGACG CGGGCCGCTG GGCCGGATCG CCCGCGCAGG GCCTCGACTT CCCCGGAGCC
GAGGAGGTCA TGGGCACCGC CCTGCAGGAG GTGTTCCTGG ACCCGACCAC CCCCACCGGG
GACGTGCTCG CCGCCCTCGA CCGGATGCCC GCGCGGGGGT GA
 
Protein sequence
MRTTPAALAV LIALLPALPA CSAAPADGGE VLTVVGWKGG GGEEARLPEL NAAFERAHPG 
VRVEHHYVGP GNYETYNNPK LASGTAADVI MVDKAKTRTW TDQGYLADLS DQPWVPAVHP
ELAPFTTVDG RTRQFTQENI GIGLYANLDL LASAGITEVP RDWPTLLATL DTLREKGKPG
LLVPNKGGWG GVQLALALAV NRLAPTWSAD YNTGRARFGP DWAPVVDELK RAVASGAVDG
RLMLGLDAWS DALTEFKAGR WAFLIQGAWK LADFRADLGF RFSLSPIPAG PAGSEPVAVT
FVGTGWAVNA DAQRPDLARE YVKFMAEPGN ARLYCEAEGA FSTLVGGTTT LPAEASALVA
AFDAGRWAGS PAQGLDFPGA EEVMGTALQE VFLDPTTPTG DVLAALDRMP ARG