| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3447 |
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| Symbol | |
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| ID | 8327637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 4011959 |
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| End bp | 4012933 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644943950 |
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| Product | integrase family protein |
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| Protein accession | YP_003101190 |
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| Protein GI | 256377530 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.3866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGTAC TCGCTGCTCA GGAAGCCTTC TTCCAGGCCC GCAGGCCCAG GAAGGATTCG
CCGCACACCA CCGCCGCGTA CCGGCGGGAC CTCGCCGGGG TCAACGCGCT GCTGGGCGAG
GTGGTCGGGC GCGAGGTGGG TGAGCTGCGA GTGGAGGACC TGACCGGGGC GCACCTGCGG
TCGGCGTTCG GGGTGTTCGC GGACTCGCAC GCCAAGAGTT CCGTGCTGCG GGCCTGGTCC
ACCTGGAACC AGTTCCTGAC GTTCCTGGTC GCCGAGGACC TGGTGCCCGG CAACCCGATG
GGGGCGGTGG CGCGGCCCAA GACGCCGCCG CTGGTGCCGA AGCCGCTGCG CGGGGAGGAC
ACGCCGGAGC GGTTGCTGGC GGCTGCGGCT GAGGGGGCGC GGAAGGCGCG GGACCCGTGG
CCGGAGCGGG ACGTGCTGGT GCTCGCGCTG GGGCTGGTGG CGGGGTTGCG GTCGGTGGAG
ATGCGGACGT TGACGCTGGC GTCGGTGGTG GGGCGGTCCG GGGAGCGGCG GTTGCACGTG
CTGGGCAAGG GCAACCGGGA CCGGTCGGTG CCGATCGAGC CCGCGATGGA GCGGGTGGTG
GACGAGTACC TGGCGTCGTG CCGCAAGCGG TTCCCGCAGG GGCGGTTCGA CCGGGGGTCG
GCGCTGCTGC GGGACCGGCA CGGTGAGCCG ATCGGGCGGG GTGGGTTGGA GTACCTGGTG
CGGTCGTGCT TCCGGTGGGC GGGGTTGCAC GACCGGGTGC CGTCGGGGGC GAACCTGCAC
GCGTTGCGGC ACACGTTCGC GACGCGGTTG GCGGAGGACG GGGCGACGGC GTCGGAGATC
ATGGCGCTGC TGGGGCACGC GTCGTTGGCG ACGAGCCAGA ACTACATCGA GGCGACGGCG
CGGGAGCAGC GGTCGGCGGT GGCGGGGAAC CGGACGTACG CGTCGTTGTC GCGGTTGCCC
GGTGGCGGGG CTTAG
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| Protein sequence | MDVLAAQEAF FQARRPRKDS PHTTAAYRRD LAGVNALLGE VVGREVGELR VEDLTGAHLR
SAFGVFADSH AKSSVLRAWS TWNQFLTFLV AEDLVPGNPM GAVARPKTPP LVPKPLRGED
TPERLLAAAA EGARKARDPW PERDVLVLAL GLVAGLRSVE MRTLTLASVV GRSGERRLHV
LGKGNRDRSV PIEPAMERVV DEYLASCRKR FPQGRFDRGS ALLRDRHGEP IGRGGLEYLV
RSCFRWAGLH DRVPSGANLH ALRHTFATRL AEDGATASEI MALLGHASLA TSQNYIEATA
REQRSAVAGN RTYASLSRLP GGGA
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