| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3445 |
|---|
| Symbol | |
|---|
| ID | 8327635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 4009778 |
|---|
| End bp | 4010566 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943948 |
|---|
| Product | Exonuclease RNase T and DNA polymerase III |
|---|
| Protein accession | YP_003101188 |
|---|
| Protein GI | 256377528 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0147122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCC CTGCTGCCAC CGGGTCGTGG GCCGACGGCC CGCTGCTGGC CCTGGACCTG
GAGACCACCG ACGTCGAGCC GCGTCGGGAC CGGATCGTCA CCGCGTCCGT GGTCGTGATC
ACGCCCGGCG CCGAGGGGGC GAAGCCGGAC GTCCGGGTGC GGACGTGGTT GGCCGATCCG
GGTGTGCCGA TCCCGGCGTC GGCGACGGCG ATCCACGGGA TCAGCACCGA GCAGGCGCGG
GCCGAGGGGC GGCCGGTGGG TGAGGTGGTG GCGGAGGTCG AGGCGCTGCT GGCCGAGTTG
TGGACGGCGT CCACTCCCCT GTGCGCGTTC AACGCGCCGT TCGACCTGAC CATGCTGGAC
GCGGAGCTGC TGCGGCACCA CGGGCGGTCG TTGCGGGTGT CGGGGCCGGT GGTGGACCCG
TTGTGCGTGG ATCGGGCGTT GGACCCGCGT CGGGTGGGCA AGCGGACGTT GGGTGCGGTG
TGCGAGCACC ACGGGGTGCG GTTGGAGGGC GCGCACACGA GCGCGGGTGA CGCGTTGGCG
GCGGCGCGGT TGGCGTGGAA GTTGGCTCGG GTGCACCCGG TGGAGGTGGG TGGGATCGCG
CTGTCGGAGC TGCACGAGCG GCAGGTGGGG TGGTTCCGGG AGCAGGAGCT GGTGTACGCG
GCGGGGGTGG ATCGGCGGAT CGACCAGGCG GAGGCGGAGG GTCGGGACTC GTCGTGGTTG
CGGCGGCGGG CTGCTGCCGT TCGGCGGAAC TCGGAGTCGT GGCCGGTGCT GCCGGAGTCG
GAGGGGTAA
|
|---|
| Protein sequence | MHSPAATGSW ADGPLLALDL ETTDVEPRRD RIVTASVVVI TPGAEGAKPD VRVRTWLADP
GVPIPASATA IHGISTEQAR AEGRPVGEVV AEVEALLAEL WTASTPLCAF NAPFDLTMLD
AELLRHHGRS LRVSGPVVDP LCVDRALDPR RVGKRTLGAV CEHHGVRLEG AHTSAGDALA
AARLAWKLAR VHPVEVGGIA LSELHERQVG WFREQELVYA AGVDRRIDQA EAEGRDSSWL
RRRAAAVRRN SESWPVLPES EG
|
|---|
| |