| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3440 |
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| Symbol | |
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| ID | 8327630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4004327 |
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| End bp | 4005337 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943943 |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003101183 |
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| Protein GI | 256377523 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000171457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAGCA CGGCGCACCG GGCGTTGCGG TTGTTGTCCC TGCTGGGGTC GCGCGGGGTG
TGGCCGCTGC GCGAGCTGGC GGAGCGGTTG GGGGTGAGCG GGCGGACGGT GCGGCGGGAC
CTGGAGGTGT TGCGGGGGCT GGGGTACGCG GTGACGTCGG TGCGGGGTCC GGACGGGGGT
TACCGGTTGG GCGCCGGGGG TGGGGTGCCG CTGGTGTTCG ACCGGGAGCA GGCGCTCGCG
GTGGCGGTGG CGCTGCAGAC GGCTCCGGGC AGCGTGTTCG GGTTGCGCGA GGACGCGGAG
CGGGCGTTGG AGACGGTGCG GTCGGCGGTG CCGGAGGTGC TGCGGGCGGC GATGGAGTCG
GTGCGGGTGA CGCGGCTGCG CAACCACTGG GAGTTCCCGG CGCCGCCGAT CGACCCCGGC
GCGCTGACGG CGGTGGGGGT GGCGGTGCGG CGTCGGCGGG TGCTGGTGGT GGAGGTGCTG
CGGGTGGACG GGTCGCGGGC GTGCCCCGGT GACGGGGATT TCGTGGCGGC GCGGGCGTTC
GAGCCGCAGC ACCTGGTGGT GTGGGCGGGG CGCTGGTACC TGGTGGGGTG CGAGCCCGGT
GGTTCGGGGT GGCGGGTGCT GCGGGTGGAC CGGGTGCTGG TGCGGCCGAC GACGGCGGGG
TTCGTGGCGC GGGAGGTGCC GGGTGGGGAT CTGGCGGGGT TCGTGATGGG CAGTCACGAC
CGGGGGGACA GTCCGGCGCG GTGGCAGTGC TCGGGGAGCG CGCGGGTGGC GCTGCCCGCG
GGGGTGGTGG CGCGGTGGGC GCCGGGTGGT TCGGTGGTGG AGCACCTGGA CGAGGGGCGC
TGCCGGTTGG TGCTGGGGGC GTGGTCGTGG GCGGGGGTGG CGGGGATTTT GGCGACGTTC
GACGCGGAGG TGGACCAGGT GCGGCCGGTG GAGCTGGTGC GGGCGTGCCG GGTGGTGGCG
CGGCGGTACG GGGCGCTGGC CGAGGAGGGG GGTGGGGATG CGGAGGGGTG A
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| Protein sequence | MASTAHRALR LLSLLGSRGV WPLRELAERL GVSGRTVRRD LEVLRGLGYA VTSVRGPDGG
YRLGAGGGVP LVFDREQALA VAVALQTAPG SVFGLREDAE RALETVRSAV PEVLRAAMES
VRVTRLRNHW EFPAPPIDPG ALTAVGVAVR RRRVLVVEVL RVDGSRACPG DGDFVAARAF
EPQHLVVWAG RWYLVGCEPG GSGWRVLRVD RVLVRPTTAG FVAREVPGGD LAGFVMGSHD
RGDSPARWQC SGSARVALPA GVVARWAPGG SVVEHLDEGR CRLVLGAWSW AGVAGILATF
DAEVDQVRPV ELVRACRVVA RRYGALAEEG GGDAEG
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