Gene Amir_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3434 
Symbol 
ID8327624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp4000299 
End bp4000964 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content78% 
IMG OID644943937 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101177 
Protein GI256377517 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCCC GCCGCGACCC GACCCGCCGT GATCCGAACC GCAGGGACCC GAACCGCAGG 
GACCTGCTGC GCGACACGGC CATCGCGGTG CTGGCCGCCG AGGGCGGGCG CGGCCTGACC 
CACCGGGCGG TCGACCGGGG CGCGGGCGTG CCGGAGGGCA CGACGAAGAA CTACTTCCCC 
ACCAGGGACG CCCTGCTCGG CGCGGCGGCG GCCCGCATGA CCTCCCTGCA CGCCGAGGCC 
GTGGACCGCC TGCGCGCGAC CACCCCGCCG GGCGTGTCCG CCGACCAGGT CGCCGGCCTG 
TACCCGGCGC TGCTGCGGCG CGCGGTGGCG GACGACCCGA CGCAGTTCCT GGCGATGGTG 
GAGCTGTACC TGGAGGCGGT GCGCAGGCCG GGGGTGCGCG AGGCGCTGGG GCGGATGGTC 
GTGGCGAACG CCGGGGCGGG CGCGGCGCTG CACCGGGTGG CGGGGCTGCC GGGGTCGGCG 
AGGGACGCGG CGCTGCTGGA CGCGTACTTC CTCGGGGTGG CGATCTCGCT GCTGGCGCTG 
CCCGAGGACG CGCTGGGGCA GGTCGGCCTC GACGACCCGG TGGACCTGGG GCTCGGGCTG 
TTCCGGGCGG CGGTGGAGCA CCAGGGGGAC GACCGGGGCG GTCCAGGGGA CGACTCGACG 
CGGTAG
 
Protein sequence
MTSRRDPTRR DPNRRDPNRR DLLRDTAIAV LAAEGGRGLT HRAVDRGAGV PEGTTKNYFP 
TRDALLGAAA ARMTSLHAEA VDRLRATTPP GVSADQVAGL YPALLRRAVA DDPTQFLAMV 
ELYLEAVRRP GVREALGRMV VANAGAGAAL HRVAGLPGSA RDAALLDAYF LGVAISLLAL 
PEDALGQVGL DDPVDLGLGL FRAAVEHQGD DRGGPGDDST R