Gene Amir_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3412 
Symbol 
ID8327602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3983048 
End bp3983824 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content76% 
IMG OID644943916 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003101156 
Protein GI256377496 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTGA GCCATCGGTA CCTGTCCGGC CCGAACCCGC GCGCCTTCGC GCACCGGGGG 
TGGCACCTGG GCGAGCTGGA GGGCATGGAG AACTCGCTGG CGGCGATGCG CCGCGCCGTG
GCCGAGGGGT TCTCCTACCT GGAGACCGAC GTGCACACCA CCTCGGACGG GGTGGTCGTG
GTGCACCACG ACTCCACGCT CGACCGCACC ACCGACGGCA CGGGCGTGGT CTCGGACCTG
CCGTGGGCGC GGGTGCGCCA GGCGCGCGTG GGCGGGCGGG AGCCGGTGGT GCGCCTGGAG
GAGCTGATGG AGGAGCTGCC GGGGGCGTTC CTCAACATCG ACGTCAAGTC CGACGCCGCC
GTCGACCCGG TGGTGGAGCT GCTGCGCCGC ACCGACGCGC TGGGCAGGGT GTGCCTGGCC
TCGTTCTCCG ACGCGCGCCT GGCCCGGCTG CGCAAGCTGC TCGGCCCGGA GCTGCTGACC
TCCATGGGGC CCCGTTCGGT GGCGGCGCTG TGGGCGGGCT GCCGGCTGCC GGGGCTGGCG
GCGGCGGCGC GCGGGGCGAT CGCGCAGGTG CCGGTGAACC AGGGCAGGCT CACCGTGGTG
GACGCGCGGT TCGTGCGGGC GGCGCACCGG CGCGGCGGCG AGGTGCACGT GTGGACCGTC
GACGAGGCCG ACGAGATGCG GCGGCTGCTG GACCTCGGGG TGGACGGGCT GGTGAGCGAC
CGGCCGGACG TGCTGCGGGA GGTGCTGCGC GAGCGCGGGG CGTGGACGGC CACCTGA
 
Protein sequence
MKLSHRYLSG PNPRAFAHRG WHLGELEGME NSLAAMRRAV AEGFSYLETD VHTTSDGVVV 
VHHDSTLDRT TDGTGVVSDL PWARVRQARV GGREPVVRLE ELMEELPGAF LNIDVKSDAA
VDPVVELLRR TDALGRVCLA SFSDARLARL RKLLGPELLT SMGPRSVAAL WAGCRLPGLA
AAARGAIAQV PVNQGRLTVV DARFVRAAHR RGGEVHVWTV DEADEMRRLL DLGVDGLVSD
RPDVLREVLR ERGAWTAT