Gene Amir_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3407 
Symbol 
ID8327597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3978995 
End bp3979573 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content75% 
IMG OID644943911 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003101151 
Protein GI256377491 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGAGG ACGTGCTCGG GCAGGTCGGC GAGCGGCTGC GCGCGCTGCG CGCCTCCCGC 
GGGGCCACGC TGGCCGACCT GGCGGAGGTC ACCGGCATCT CCAAGAGCAC CCTGTCGCGG 
CTGGAGTCCG GGCAGCGGCG GCCCAGCCTG GAGCTGCTGC TGCCGATCGC CCGCGCCCAC 
CGGGTGCCCC TGGACGAGCT GGTCGGCGCG CCGCCGGTGG GCGACCCGAG GGTGCGGCTC 
GCGCCGGTGC GGCGCAACGG CATGACCGTG GTGCCGCTCA CCCAGCAGCC CGGCGGCATC 
CAGGCGTACA AGATGCTCAT CCCCTACCGG GGCGACGACC CCGACCCGCG CACCCACGGC 
GGCTACGAGT GGCTGTACGT GCTCGCGGGC AGGCTGCGGC TGGTGCTCGG GCAGCACGAC 
GTGGTCCTGG TCTCCGGGGA GGCCGCCGAG TTCGACACGC GCGTGCCGCA CTGGTTCGGC 
GCCGCCGAAC CGGACCGGCC GGTGGAGGTG CTGAGCCTGT TCGGCAAGCA GGGCGAGCAG 
ATCCACATGC GCACCGGCTC CGCGCGCAAG GACGGCTGA
 
Protein sequence
MDEDVLGQVG ERLRALRASR GATLADLAEV TGISKSTLSR LESGQRRPSL ELLLPIARAH 
RVPLDELVGA PPVGDPRVRL APVRRNGMTV VPLTQQPGGI QAYKMLIPYR GDDPDPRTHG 
GYEWLYVLAG RLRLVLGQHD VVLVSGEAAE FDTRVPHWFG AAEPDRPVEV LSLFGKQGEQ 
IHMRTGSARK DG