Gene Amir_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3404 
Symbol 
ID8327594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3976561 
End bp3977085 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content75% 
IMG OID644943908 
ProductNUDIX hydrolase 
Protein accessionYP_003101148 
Protein GI256377488 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.321528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACGA CGGCGCGGCT CAGCGCGGGC ATCCTGCTGC ACCGGACAGG CGCGGGCGGG 
CGGACCGAGG TGCTGCTCGG GCACATGGGC GGTCCGTTCT GGGCGCGCAA GGACGCGGGG
GCCTGGTCGA TCCCCAAGGG CGAGGTGGAG GACGGCGAGG AGCCGGAGGA CGCCGCGCGC
AGGGAGTTCG CCGAGGAGCT GGGGGTGCCG GTGCCGGAGG GGCCGCTGGA GCCGCTCGGG
ACGGTGCGCC AGTCGGGCGG GAAGACCGTC GTGGCGTGGG CCCTTCGTGG GGATCTCGAC
CCCGACACGG TGACTCCGGG AACCTTCGAG CTGGAGTGGC CGAGGGGGTC CGGGCAGCTC
AGGGCGTTCC CGGAAGTCGA CCGGGTCGGC TGGTTTGACC TGGTCGAGGC CGCCCGACTG
GTGGTGACGG CGCAGCGCGG CCTGCTGGCC CGCCTGCCGG GCGCCGAGGT GCCCGGTGAG
TCCGATCCGG GCGGTGTCGT CGCTGGTGAC GGGGGTGGCG GGTGA
 
Protein sequence
MTTTARLSAG ILLHRTGAGG RTEVLLGHMG GPFWARKDAG AWSIPKGEVE DGEEPEDAAR 
REFAEELGVP VPEGPLEPLG TVRQSGGKTV VAWALRGDLD PDTVTPGTFE LEWPRGSGQL
RAFPEVDRVG WFDLVEAARL VVTAQRGLLA RLPGAEVPGE SDPGGVVAGD GGGG