| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3376 |
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| Symbol | |
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| ID | 8327566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3947820 |
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| End bp | 3949580 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644943882 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003101122 |
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| Protein GI | 256377462 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCA CCGTCGCGGA CGCGCTGGTC CGCCGCCTGC GCACGTGGGG CGTGCCGAGG
GTGTTCGGCT ACGCCGGTGA CGGCATCGAC CCGGTCCTGG CCGCGCTGCA CCGGGCGGGC
GGGGACCCGG AGTTCGTGCC CACCCGGCAC GAGGAGCTGG CCGCGTTCGC CGCCTGCGGG
CACGCCAAGT ACACCGGCGA GGTCGGGGTG TGCCTGGCCA CGCAGGGTCC GGGCGCGATC
CACCTGCTGG CCGGGCTCTA CGACGCCAAG CTGGACCGCC GCCCGGTCGT GGCGCTGGTC
GGGCAGGTGG TGTCCACCGC GCTGGGCACC GGCTACCTGC AGGAGGTGGA CCTGCACTCG
CTGCTCAAGG ACGTGTGCGG TCGCTACCTG CAGACCGTGT CCACGCCCGA GCAGCTGCCC
GTGCTGCTGG ACAACGCGAT GCGCACCGCG ATCGCCGAGC GCGTGCCGAC CTGCCTGATC
CTGCCGCACG ACGTGCAGCG CGCCGACGCC GTCGAGGACC CGCCGCACGC GCACGGCGTG
GTGCCCTCCT CGGCGGTGAC CGCCCGCCCG CGCGTGCTGC CCCGCGAGGA CGACCTGCGC
CGGGCCGCCA AGGTGCTGAA CGCCGGTCGC CGCGTCGCGC TGCTGGTCGG GCGGGGCGCG
GCGGGGGCCG GGCCGGAGAT CGGCAAGGTG GTCGAGGTGC TGGGCGCGGG CGTGACCACG
TCGCTGCTGG GCAAGCCGGT GCTGCCGGAG GGCGAGCCGT GGCACACCGG CGTCATGGGG
CACCTGGGCA CGACCGCGTC GGCCGAGCTG ATGGCCGGGT GCGACACGCT GCTGGTGGTG
GGCAGCAACG ACCCGTGGAC CGAGTTCTAC CCCGCGCCGG GGCAGGCCCG CGCCGTGCAG
GTCGACGTGG ACGCGCGCGT GGTCGGCAGC AAGCACCCGG TGGAGGCCGC GCTGATCGGC
GACGCGCGCG AGTCGCTGCG GGCGCTGCTG CCGCTGCTGC GCCGCAACCC AGACCGCGGC
TGGGAGCGTC GGATCTCCGC CGCCACCACC CGCTGGCGGC GGATCGCCGA GGAGCGCGCG
GGGGCCCCGG CGGACCCGCT GAACCCGGAG CTGGTGGTGC GCGAGCTGTC CGCGCACCTG
CCGCCGGACG TGCGGGTCGC GGTGGACGTC GGCTCCGCCA CCTACTGGTA CGCCCGCCAC
CTGGCCCTGC CGCCGGGGGC GCCCGCGCAC ACCTCCGGCT ACCTGGCGTC GATGGGCTGC
GCCCTGCCGT ACGGCCTGGC GGCGAAGCTG GACGCCCCGG ACCGGCCGGT GGTGGCGCTG
GTGGGCGACG GGGCGATGCA GATGAACGGC CTGCTGGAGC TGATCACCCT GGCCGACCGG
TGGCGGGCGT GGGCGGATCC GAGGTTCGTG GTGCTGGTGC TGCACAACCG GGATCTGAAC
GAGGTGACCT GGGAGCAGCG CGAGATGGAG GGCGACCCGC GCTTCCCGGA CTCGCAGCGG
GTGCCCGCGT TCCCGTACGC GGCCCACGCC GAGCTGCTGG GGCTGCGGGG CGTGCGCGTC
GACTCGCCGG AGGGGTTGGC CGAGGCGTGG CGCGCGGCGT GGGCCGCCGA CCGGCCGGTG
GTCGTGGAGG CGGTGGTGGA CCCGGCGGTG CCGCTGCTGC CGCCGGAGCT GCCGGAGGAG
AAGGTGGCGG CGGTGCTGCG GGGGTTGGAC CAGGAGCCGG GCGGGGAGGC GGAGCGCGAG
AACGTGCGGC GGCAGTCCTG A
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| Protein sequence | MSGTVADALV RRLRTWGVPR VFGYAGDGID PVLAALHRAG GDPEFVPTRH EELAAFAACG
HAKYTGEVGV CLATQGPGAI HLLAGLYDAK LDRRPVVALV GQVVSTALGT GYLQEVDLHS
LLKDVCGRYL QTVSTPEQLP VLLDNAMRTA IAERVPTCLI LPHDVQRADA VEDPPHAHGV
VPSSAVTARP RVLPREDDLR RAAKVLNAGR RVALLVGRGA AGAGPEIGKV VEVLGAGVTT
SLLGKPVLPE GEPWHTGVMG HLGTTASAEL MAGCDTLLVV GSNDPWTEFY PAPGQARAVQ
VDVDARVVGS KHPVEAALIG DARESLRALL PLLRRNPDRG WERRISAATT RWRRIAEERA
GAPADPLNPE LVVRELSAHL PPDVRVAVDV GSATYWYARH LALPPGAPAH TSGYLASMGC
ALPYGLAAKL DAPDRPVVAL VGDGAMQMNG LLELITLADR WRAWADPRFV VLVLHNRDLN
EVTWEQREME GDPRFPDSQR VPAFPYAAHA ELLGLRGVRV DSPEGLAEAW RAAWAADRPV
VVEAVVDPAV PLLPPELPEE KVAAVLRGLD QEPGGEAERE NVRRQS
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