| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3340 |
|---|
| Symbol | |
|---|
| ID | 8327530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3917823 |
|---|
| End bp | 3918200 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644943850 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003101090 |
|---|
| Protein GI | 256377430 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGAG GCTCGCAGTT CGCGCAGGGT GGCCCAGCGG CCCGGTATGA GGTGTTTCAC
ACCGACTGCC CGGCGCGGGA CGTGGTCGAC CACGTCACCG GCCGGTGGGG GATCTGGGTG
CTGATCTCCT TGCGCGGCAA CGACCTCAGG TTCTTCGAGC TGCGCGACAG CGTCCGGGGG
ATCAGCGAGA AGATGCTCTC GCAGACCCTG CGCGTGCTGG TCGAGGACGA CCTGGTGTGG
CGGCGCGTCG AGCCGACCAC CCCGCCCCAG GTCACCTACG GGCTCACCCC GTTCGGGCGC
GAGGTCGGGC AGCCGCTCAC CGACCTGTTC GACCTGATCA CCCGACGGCT CCCGCCGCGC
GAGGACGTCC GGACATAG
|
|---|
| Protein sequence | MAGGSQFAQG GPAARYEVFH TDCPARDVVD HVTGRWGIWV LISLRGNDLR FFELRDSVRG
ISEKMLSQTL RVLVEDDLVW RRVEPTTPPQ VTYGLTPFGR EVGQPLTDLF DLITRRLPPR
EDVRT
|
|---|
| |