| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3338 |
|---|
| Symbol | |
|---|
| ID | 8327528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3915744 |
|---|
| End bp | 3916769 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644943848 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003101088 |
|---|
| Protein GI | 256377428 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.680798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGGCA GCCGGGAGCA GGCCGATTCC AGCAGGCCGG TCACCATCTC CTACATCGCC
GCCAGCGCGG GCGTCTCCGT GCCGACCGTC TCCAAGGTCC TCAACGGCCG CTCGGGCGTC
GCGGCGGGCA CCAGGGCGCG CGTCGAGGCC CTCATCGACG AGTACGGCTA CCGCAAGTCC
AGCCCGACCG GGCGCGGCGC CGTCGTGGAC CTGGTGTTCG ACGAGCCCGC CGACATGTGG
GGCGTGGAGA TCATCCGGGG CGTGCAGCGG GTCGCGCGCA GGCACGGGGT CGGGCTGGTG
CTGTCCGAGT TCGGCCCGAG GGGCAGCGCG GTCCGCTACT GGATCGACGA CGCGCTGGAC
CGCCGTCCCG CCTGCGTGGT CACCGTCGCG CAGCTGTCCG CCGAGGAGCG GGACAGGTTG
CGGGCGCAGG GCATCCCGTT CGTGGTGTTC GACCCGACCG GCGAGCTGCC CGACGACGTG
CCGTTCGTCG GCGCGACCAA CTGGTCCGGC GGGCGCGCGG CCACCCGGCA CCTGACCGGG
CTGGGCCACC GCCGGATCGG CGTGCTCACC GGCCCGGACG ACCTGCTGTT CTGCCGCGCC
CGCCTGGACG GCCACCGCTC CGCGCTGGAG GACGCGGGAC TGGTCGCCGA CCCGGCCCTC
GTCGCGCGCG GCCCGCTGAC CAGGGACGGC GGGCACGCGG CGGCCCGCGC CCTGCTGAGC
CTGCCCGAGC CGCCGACCGC GCTGTTCGCC TGCAACGACC TGCAGGCGCT CGGCGCCTAC
CGGGCCGCCC GCGAGGCGGG CCTGCGGGTG CCGGAGGACC TGAGCGTGGT GGGCTTCGAC
GACCTGCCGG TGGGCGACCT GGTCGACCCG CCGCTGACCA CCGTGCGCCA GCCGCTCGCG
GAGATGGCGG CAGCGGCGGC GGAGCTGGCG CTCGCGCTGG GCCGCGGCGA GCGGCCACCG
CAGCTGGGCG TGGAGCTGGC GACCACCCTC ACCGTCCGCC GCAGCACCGC CCCGCCGCGC
GCCTGA
|
|---|
| Protein sequence | MSGSREQADS SRPVTISYIA ASAGVSVPTV SKVLNGRSGV AAGTRARVEA LIDEYGYRKS
SPTGRGAVVD LVFDEPADMW GVEIIRGVQR VARRHGVGLV LSEFGPRGSA VRYWIDDALD
RRPACVVTVA QLSAEERDRL RAQGIPFVVF DPTGELPDDV PFVGATNWSG GRAATRHLTG
LGHRRIGVLT GPDDLLFCRA RLDGHRSALE DAGLVADPAL VARGPLTRDG GHAAARALLS
LPEPPTALFA CNDLQALGAY RAAREAGLRV PEDLSVVGFD DLPVGDLVDP PLTTVRQPLA
EMAAAAAELA LALGRGERPP QLGVELATTL TVRRSTAPPR A
|
|---|
| |