| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3336 |
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| Symbol | |
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| ID | 8327526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3913209 |
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| End bp | 3914822 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644943847 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003101087 |
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| Protein GI | 256377427 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTGG ACCGCAGGGC TTTTTTAGGT CTTCTCGCCG CAGCGGGCGG AACGGCGCTG
GTCGGGTGCG AGGCGCCTGC CCCGCGCGGC GGTTCCGCGC TCGGCGGCGA CGCGCTGGCG
GCGCTGCTGC CCGCGCACCG GCCGGTGGAG TTCGCCGAGC CCGACCTGCC CGGCGTCAAC
GGCTCGGTGC CCGGCTACCT GACCTACCCG GCCAACCCGG TGCGCGGCGT GCGGGGGCCG
GTGCTCAGCG GCGAGGTCAC CGCGATGACC CCGTCGTTCT GGCCGCCGGC GCCGGGGCCG
GGGCGGAACT CCTACTACGA CGCGGTCAAC GAGCGCCTCG GCGGCGCGGT GCGGTTCGAG
ACCGTGTCCG GGGCCGACTA CCAGGCCAAG CTCTCCGCCC TGATGGCGGC GCGGCAGGTG
CCGGAGCTGA CCGTGGTGCC CACCTTCACC ATGCCGCCCC GGTTCAGCGA GGGCGTGGGC
GAGGTGTTCC GCGACCTGAC CGACTTCCTG TCCGGCGAGC GCGTCGCCGA CTACCCGATG
CTGGCCAACA TCCCCACCGA CTCGTGGCAC GCGTGCGTGC ACAACGGGCG CCTGCACGGC
GTTCCCTACC CCGGCCAGCT GTTCCCCGAG GTGCTGTTCT ACCGGGACGA CGTGTTCGAG
CAGCTCGGGG TGGAGCCGCC GCGCAGCGCC GAGGAGTTCG CGGCGATGGC CAAGCGGCTC
AACGACCCCG CGAACGACCG GTGGGCGCTC GGCGACGTGT TCCGCTCGCT CGTCCGCGCC
TTCGGCGGCC GGGGCGACTG GGTGCGCGAC GACTCGGGCA AGCTGCTGAA CCAGCTCGAA
ACCCCCTGGT ACGCCGAGGC GGTGCGGTTC ACCCGGTCCC TGTACGACGC CGGGTGCGTG
CACCCGGACA TCGTGGCGGG CAACTGGAAC CGCGGCAACG AGCTGTTCGC GGCCAAGCGG
ATGATCGTCA ACCAGGGCGG GATGGGCGCG TGGGCCGAGC AGGTCGCGCA GCAGCGGCCC
GCCGACCCCG GTTTCCGGAT GACCGCGCTG CCGCTGTTCG CGCACGACGG CGGCGAGCCC
GCCTACCCGG TGGCCGCGCC GACGGTGATG GTCGCGTTCG TCCGCAAGGA CGTGACCGAC
GAGCGGGTGC GGGAACTGCT GCGGCTGTGC GACTTCGCCG CCGCGCCGAT CGGCACCGAG
GAGCACCGGC TGCTGCGGTA CGGGGTGGAG GGCGTGCACA GCGAGCGCGA CGCGCGGGGC
AACCCGGCGC TGACCCCGCT GGGGCAGAAG GAGATCACGC TGACCTACGG GTTCGCGGCG
GGCCCGCCGG AGGCGATCAC CACCACCGAC CACCCGGACC TCGTGCGGGC CCAGCACGCC
TGGTACGCGC GGGAGTGGGG ACACCAGACC AAGCCGCTGG CGTTCGGGCT GCGCCTGGAG
GAGCCGCCGG AGTTCGCGAC CCTGGCGAAG GAGTTCGCGG ACCGGACCAC GGACGTCCTG
CGCGGGCGGG CCGAGCTGTC CGAGGTGGAC GGACTGGGCG AGCGGTGGCG CAAGGCGGGC
GGGGATCGGC TGCGGGAGTT CTACGACAAG GCGCTGCGGG ACGCCGGGCG CTGA
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| Protein sequence | MPVDRRAFLG LLAAAGGTAL VGCEAPAPRG GSALGGDALA ALLPAHRPVE FAEPDLPGVN
GSVPGYLTYP ANPVRGVRGP VLSGEVTAMT PSFWPPAPGP GRNSYYDAVN ERLGGAVRFE
TVSGADYQAK LSALMAARQV PELTVVPTFT MPPRFSEGVG EVFRDLTDFL SGERVADYPM
LANIPTDSWH ACVHNGRLHG VPYPGQLFPE VLFYRDDVFE QLGVEPPRSA EEFAAMAKRL
NDPANDRWAL GDVFRSLVRA FGGRGDWVRD DSGKLLNQLE TPWYAEAVRF TRSLYDAGCV
HPDIVAGNWN RGNELFAAKR MIVNQGGMGA WAEQVAQQRP ADPGFRMTAL PLFAHDGGEP
AYPVAAPTVM VAFVRKDVTD ERVRELLRLC DFAAAPIGTE EHRLLRYGVE GVHSERDARG
NPALTPLGQK EITLTYGFAA GPPEAITTTD HPDLVRAQHA WYAREWGHQT KPLAFGLRLE
EPPEFATLAK EFADRTTDVL RGRAELSEVD GLGERWRKAG GDRLREFYDK ALRDAGR
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