Gene Amir_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3334 
Symbol 
ID8327524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3910141 
End bp3911040 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content74% 
IMG OID644943845 
Productshort chain dehydrogenase 
Protein accessionYP_003101085 
Protein GI256377425 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGA ACTGGACCGA GCAGCACGTC CCCGACCAGA CCGGCCGGAC CGCCGTGGTC 
ACCGGCGCCA ACACCGGGCT CGGCTTCGAG ACCGCGCGGG TGCTGGCCGA ACGCGGCGCG
ACGGTCGTGC TGGCCGTCCG CGACGTCGAG AAGGGCAAGC GGGCCGCCGA CCGCATCGCC
GGCGAGGTCC TGGTGCAGGA GCTGGACCTG ACCTCGCTCG ACTCGGTCCG CGAGGCCGCC
GCCTCCCTGC GCGCCGCCCA CCCCCGGCTC GACCTGCTGA TCAACAACGC GGGCGTCATG
TACACCCCCA GGCTCACCAC CCGCGACGGC TTCGAGCTCC AGTTCGGCAC CAACCACCTC
GGCCACTTCG CCCTCACCGG CCTGCTGCTG GAGCGCCTCC TGCCCGTCCC CGGCTCCAGG
GTGGTCACGG TCAGCAGCAC CGGGCACCGC ATCCAGGCCG CGATCCACTT CGACGACCTG
CACTGGGAGC GCTCGTACAG CCGGGCGGGC GCCTACGGCC AGTCCAAGCT CGCGAACCTG
ATGTTCACGT ACGAGCTCCA GCGCCGCCTC GCCGCGCACG GCGCCACCGC GGCGGTCGCC
GCGCACCCCG GCATGTCCAA CACCGAGCTG GCCCGCAACA CCCCGGCCGC GATCCGCGTC
CCGGTCACCT GGCTCGCGCC GGTGCTCACC CAGCCCGCGA CCATGGGCGC GCTGCCGACC
CTGCGGGCGG CCACCGACCC GGCGGCGCTC GGCGGGCAGT ACTACGGGCC CGGCGGGCGC
GGCGAGGTCA AGGGGCACCC GAGGGTGGTC GCCTCCAGCC CGCAGTCGCA CGACGCGGAG
GTCCAGCGGC GGCTGTGGGA CGTCTCCGAG CGCCTCACCG GCGTGGTCTT CCCCGTGTGA
 
Protein sequence
MTENWTEQHV PDQTGRTAVV TGANTGLGFE TARVLAERGA TVVLAVRDVE KGKRAADRIA 
GEVLVQELDL TSLDSVREAA ASLRAAHPRL DLLINNAGVM YTPRLTTRDG FELQFGTNHL
GHFALTGLLL ERLLPVPGSR VVTVSSTGHR IQAAIHFDDL HWERSYSRAG AYGQSKLANL
MFTYELQRRL AAHGATAAVA AHPGMSNTEL ARNTPAAIRV PVTWLAPVLT QPATMGALPT
LRAATDPAAL GGQYYGPGGR GEVKGHPRVV ASSPQSHDAE VQRRLWDVSE RLTGVVFPV