Gene Amir_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3323 
Symbol 
ID8327513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3899723 
End bp3900349 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content75% 
IMG OID644943834 
Producthypothetical protein 
Protein accessionYP_003101074 
Protein GI256377414 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0115476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC TACGCGGGAT CCAGCGGCGG GAACTGGCCG CGCTCGTCGA CGACCTGGCC 
GCGCTCACAC CCGAGCAGTG GCGCGCGAGG ACGCTCTGCG CGGAGTGGGA CGTGGAGGAG 
ACCGTGGCGC ACCTGGGCGC GGCGGCCACG ACCAACATGC CGCGCTGGGT GCTCAGCATG 
GTCGGCGCCC GGTTCGACGC GGACCTGCAC AACCGACGCC GCCTCACCGA TTTCCGGGGC 
GCGGACCCGG CGGAGACGCT GGAGCGGTTC CGGGCGGTCG GGCCGATCGC GCTGCCGACC 
CACTCCTCCC CCGCCGGGCT GGGCGAACTG CTCGTGCACG CCGAGGACAT CCGGAGACCG 
CTGGGGCTGC GCCGCTCACC CGACGCCGAG GGGCTGCTCG CCGTCGCGAC CTTCTTCGCC 
GCCAAGGACT ACGCGGTCAA GAGCAAGACC CTGTCGCGGG GGCTGGCGCT GCGGGCGGTG 
GACGCGGACT TCAGCGTCGG CGACGGGCCG GAGGTGCGGG GGCCGCTGCT GTCGCTGGTC 
ATGGTGATGG CCGGTCGCCG CGCGCACCTG GCCGACCTGG CCGGGGACGG GGTGGCCGAG 
CTGGGCGGGC GGTTGACCAC GGCCTGA
 
Protein sequence
MTDLRGIQRR ELAALVDDLA ALTPEQWRAR TLCAEWDVEE TVAHLGAAAT TNMPRWVLSM 
VGARFDADLH NRRRLTDFRG ADPAETLERF RAVGPIALPT HSSPAGLGEL LVHAEDIRRP 
LGLRRSPDAE GLLAVATFFA AKDYAVKSKT LSRGLALRAV DADFSVGDGP EVRGPLLSLV 
MVMAGRRAHL ADLAGDGVAE LGGRLTTA