| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3316 |
|---|
| Symbol | |
|---|
| ID | 8327506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3891062 |
|---|
| End bp | 3892516 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943828 |
|---|
| Product | TAP domain protein |
|---|
| Protein accession | YP_003101068 |
|---|
| Protein GI | 256377408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0266981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGAA CCCTCTCCCT GGCAGTCGTG ATCACCGCGC TGACGGCCGT GGTCACCCCC
ACCGCGTCCG CCGCCCCGGA CACCTCCCCA CCCCCGGTGC GCTGGGGCCC GTGCGAGGAA
CCCGTCCCCA CGATCCTGCG GTGCGCGCGG GTCGAGGTCC CGCTGGACTA CCGGGACCCG
CGCGGCCGGA AGATCCAGAT CGCGATCTCC AAGCTGCCCA GCACGAACCC CGAGCGCCGC
AGGGGCGTGC TGCTGACCAA CCCCGGCGGC CCCGGCGGCG CGGGCGTCGC CTTCCCCGCC
GTGTTCCCGG CCGCGCGGAT GCCGCAGGAG GTCCTGGACT CCTACGACAT CATCGGCTTC
GACCCTCGCG GCGTCGGCCT CAGCACCCCG GTGACCTGCG ACCTGACGCC GGAGCAGCAG
GCGCGCGGCA ACTTCCCGCC GTACGCCCGC ACCGACGCCG ACGTGACGCG CGAGGTCGGC
CACGCGCGCG CCATCGCCGC CCAGTGCGCC ACCTCCGCGA CGGCCGACCT GCTGCCGCAC
ATCACCACCG CGAACACCGC CCGCGACGTG GACCGCGTCA GGGAAGCCCT GGGGGAGCGC
AAGATCTCCT ACCTCGGCTA CTCGTACGGC ACCTACCTCG GCGCCGTGCA CGCGTCCCTG
TTCCCGGACC GGGGCGACCG GTTCGTGCTC GACAGCAGCC TCGGCCCGGA CGGCTACGAC
GTGAAGGCCA TGCGGCGCTT CGCGCTCGGC CTCCAGGACC GGTTCCCGGA CTTCGCCGCG
CACGCCGCCG CCCACCCCGA GTACGGCCTC GGCGCGACCC CCGAGCAGGT CACCGCCAAG
TTCTTCGAGC TGGCCGAAAG CCTGGACGCG CGCCCGGTCC AGGGGGTCGA CGGCACGATG
TTCCGCGGCC TGACGTTCGG CTACCTCTAC AGCGACGCGG ACATGCCGAA GCTCGCCGAG
GCCTGGCAGG CCCTGGAATC CGGCCGCCCG CTGCCCGAGG ACCCGCCGGT CGAGGGGGCC
GAGAACCTGA TGGCGGCCCG GTTCCACGTG GTCTGCGGCG ACACCCGCTG GCCGTCGTCG
GTCACGACCT ACCAGCGCAA CGCGGCCGTG GACCGGGTCC GCTACCCGAT GCTCGGCGGC
TCGACCGCGA GCGTCAACCC GTGCGCGTTC TGGCCGGGGG AGCGGGTCGA GGGTCCGGTG
CGGATCACCG GCAGGGGACC GGCGAACGTG CTGATCTCCC AGAACGAGCG CGATCCCGGC
ACGCCGCTGG CCGGTGCGCG GGAGATGCGG CAGGCGCTCG GCGGGCGCGC CGTGCTGGTG
ACCGCCGACC AGGGCGGGCA CGGGGCGTAC CTGTTCGGCG CCAACAAGTG CGCGAACGAC
GCGGTGACCG CGTTCCTCGC CAGGGGCGAG CGCCCGAGCG GCGACCTGGC CTGCCCGGCG
CAACCGGCCC GGTGA
|
|---|
| Protein sequence | MRRTLSLAVV ITALTAVVTP TASAAPDTSP PPVRWGPCEE PVPTILRCAR VEVPLDYRDP
RGRKIQIAIS KLPSTNPERR RGVLLTNPGG PGGAGVAFPA VFPAARMPQE VLDSYDIIGF
DPRGVGLSTP VTCDLTPEQQ ARGNFPPYAR TDADVTREVG HARAIAAQCA TSATADLLPH
ITTANTARDV DRVREALGER KISYLGYSYG TYLGAVHASL FPDRGDRFVL DSSLGPDGYD
VKAMRRFALG LQDRFPDFAA HAAAHPEYGL GATPEQVTAK FFELAESLDA RPVQGVDGTM
FRGLTFGYLY SDADMPKLAE AWQALESGRP LPEDPPVEGA ENLMAARFHV VCGDTRWPSS
VTTYQRNAAV DRVRYPMLGG STASVNPCAF WPGERVEGPV RITGRGPANV LISQNERDPG
TPLAGAREMR QALGGRAVLV TADQGGHGAY LFGANKCAND AVTAFLARGE RPSGDLACPA
QPAR
|
|---|
| |