| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3308 |
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| Symbol | |
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| ID | 8327498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3882421 |
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| End bp | 3885438 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 81% |
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| IMG OID | 644943820 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003101060 |
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| Protein GI | 256377400 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000076041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGGGA GCGCGGGGGT GCGGGTCGTG CTGCTCGGCG CGTTCCGGGT CCGCCGCGAC
GACGTCGCCC TGGACGTGCC GGGGGCGCGG GTGCGGGCGC TGCTGGTGCG GTTGGCGCTG
GCCGGTGGGC GGGCGGTGGA GCCGGGCGCG CTGGTCGACG CGATCTGGGG CGACGAGCCG
CCCGCCGGGC CGGGGCCGGC GTTGCAGGCG CTCGTCTCCC GGCTGCGGCG GGCGCTCGGC
GCGCCGGGCG CGGTCGCGCT GGGGGTGGGC GGGTACCGGC TCGTGGCGGA CGTGGACGCG
GCGCGGTTCG AGGAGCTGGC CGCGCGGGGC GGGGAGGACG CGCTGCGGGA GGCCGCCGCG
CTGTGGGGCG GGCGGGTCGG GGGCGAGCCG CCGGTGGTCG CGGCCGTCGC GCCGCGGGTG
GCGACCCGGT TGGCGCGGCT GTCGGTGGAG GTGGTGCTGG ACCTGGCGGA GGTCGAGCTG
GCGCTCGGGC GCACCGGGGC GGCCATCGGT GGGGCGAGCG GGGTGCTGGC CGAGCACCCG
GCGCACGAGC GGGCCGCCGG GGTGCTGGTG GACGCGCTCG CGGGCGCGGG ACGGCAGGCC
GAGGCGCTGG CGGCCTACGA GCGGGTCCGC GCGGCGCTGG CCGACGAGCT GGGCGCCGAC
CCCGGCACGG CCCTGCGCGA GCGCCACCTG CGGCTGCTGC GCGCCACCCC GCCACCGCTC
CCCCGGCCGA ACGCGCTGCC CGCGCCGGTG ACGGGCTTCC TCGGCCGGGA CGTCGACCTC
GCCCGCGTCG CCGACCTGCT GGCCGCCGGG CGGCTGGTCA CCGTCGTCGG GCCCGGCGGG
GTGGGCAAGA CCCGGCTGGC CGTGGAGGCG CTGCGCCGGG ACCGGGACGC GCTGCTGGTG
GACCTCGCGC CGGTCGCCGA GCCCTCGGAG GTCGTCGCCG CCGTGCTCGC CGGGATCGGG
CTGCGCGGCG ACCGCGACCG GCCGGGCGGG GACGCGACGG CGCTGCTGGC CGCCGAGCTG
GCGGCGCGCA GGTCGGTGCT GCTGCTGGAC AACTGCGAGC ACCTGGTCGA CGCCGTGGCC
CACCTGGTCG CGCTCCTGCT CCCCCGCTGC CCCGAGCTGC GCGTGCTCGC CACCAGCCGG
GAACCCCTGG CGGTCGACGG GGAGGCGCTG GTCCCGCTGG GGCCGCTCGC GCTGCCCGGA
ATCGGGGACG GGCTTGACGC CGCGGTCGGC ACGGCCTCGG TGCGGCTGTT CGCCCAACGG
GCGTCGGCGG TGCGCCCCGG TTTCGCCGTC GACGCCACGA CGCTGCCGGA CGTGGTGCGC
CTGGTGCGGG CGCTGGACGG GCTGCCGCTG GCGCTGGAGC TGGCCGCCGC CCGGTTGCGC
GCCCTGCCGC TGCCCGACCT GGTGGCCGGG TTGTCGGCGC GGTTCCGCCT GCTGGCGGGC
GGGAACCGGG CCGCGCCGCC CCGGCACCGC ACGCTGCGCG CGGTGATCGC GTGGAGCTGG
GACCTGCTGG ACGGGCCCGA GCGGGCCGTG GCCGAGCGGA TCTCCGTGCT GCCCGGCGGG
GTCACCCCGG AGTCGGCCGC CGCCGTCTGC GCGGGCGCCG TGCCCGCCGA CGAGGTGCCC
GAGCTGCTGG CCGCGCTGGT CGACCGGTCG CTGCTGAGCC TGGTCGGGGG TCGGCGGCGG
ATGCTGGAGA CGGTGCGCGC GTACGGGGTC GAGCGCCTGG CCGCCGCCGG GGACTTGAGC
GCGGTCCGCG ACCTGGCCGC CGCGCACGTG GCGGGGGTGC TGGCGGGGCA GGACGCGGTG
CTGCGCGGGC CGGGGCAGCG CGCGGCGGTG GCGGCGATCG GCGCGGAGCA CGACAACGCG
GTGGCCGCGC TGCACCACCG GTGCGCCACC GGGGACGCGG ACGGGGCGCT CGCGCTGGCG
CTGTCGCTGG TCTGGTACTG GCAGGTGTTC GGCCGCCAGT CCGAGGGCGC GCACTGGCTC
GGGCGGGCGC TGGCGGTGCC CGGCGGGCCG TCCCCGGAGC GGGACTGCGC GCGGGCCGCC
CACCTGCTCG GCCTGGCCGA CGGCGGGCAC GGGGTGGGTG ATCGCGGGGA GGTGGGGGCG
CTCGCGGACC GGGTGCTGGC GCACCGGGGG CTCCCCGGTC ACCTGCGGGT GCTCGGGGCG
GTCCTGCTGT TCCTGCTGGG GCGCGGCGAG GGGGTGTTCC GGGAGCTGGG CGCGGGCGGC
GGGTGGTTGT CCGGGCTGGC GCACCTGTTC CTGGCCGAGC TGGCGGAGAA CGCGGGCGAG
CTGGACCGGG CGCGCGGGCA CGCGGAGGTG TCCCTGGACC GGTTCCGGGC GGCCGGGGAC
GGGTGGGGCG TGGCGGGGGT GCTGCCGGTG CGGGCGCGGG CGCGGCGGTA CGACGACCTG
GACGGGGCGT GGGCGGACCT GCGGGAGGCG CGGGCGCTGG AGGGGGAGTT CGGGGCGCTG
AGCCCCGGTG ACCGGGTGCG GGCGGACCTG CGGTGGGTCG ACCTGCACGA GCGGCGCGGT
GACAGCGGGG CGGCGCTGGA GGTGCTGGCC GCGGCCCGTG CTCGGGGGGA GCAGGTCGCG
GTGGTGGACG CGCGGGAGGC CGCGCTGCGG GTGCGGCTCG GGGACCTGGG GCGGGCGGGT
GAGCTGCTGG CCGGGGTGGG TGGGGCGGTG GGCGACCTGG CGCGGGCCGC GTATCGGGTG
GCCTCGGGGG ACCTGGCGGG TGCGGAGCGG GCGTTGCGGC GGGCGCGGGT GGTGGCGGCT
GCGAGCGGGG AGCTGCCCGC GCTGGCCCCG GTGGCGGTGG GGGCGGCGGC GCTGGAGCAG
GCGCGGGGGC GGTGGGCGGG GTCGGGGGTG CTGCTCGGGA CGGCCGCGCG GGTGCGGGGC
GCGCACGACC GCACCGACCC CCTGGTGCGC GAGCTGGTCG ACCGGGGGCG GGCGGCGGTG
GGCGGGAGCG CGTTCGCGGC GGCGTACGCG CGGGGGTGGG AGGCGGAGCG GGACGTGGCG
GCGGCGTTCG TGCTCTGA
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| Protein sequence | MDGSAGVRVV LLGAFRVRRD DVALDVPGAR VRALLVRLAL AGGRAVEPGA LVDAIWGDEP
PAGPGPALQA LVSRLRRALG APGAVALGVG GYRLVADVDA ARFEELAARG GEDALREAAA
LWGGRVGGEP PVVAAVAPRV ATRLARLSVE VVLDLAEVEL ALGRTGAAIG GASGVLAEHP
AHERAAGVLV DALAGAGRQA EALAAYERVR AALADELGAD PGTALRERHL RLLRATPPPL
PRPNALPAPV TGFLGRDVDL ARVADLLAAG RLVTVVGPGG VGKTRLAVEA LRRDRDALLV
DLAPVAEPSE VVAAVLAGIG LRGDRDRPGG DATALLAAEL AARRSVLLLD NCEHLVDAVA
HLVALLLPRC PELRVLATSR EPLAVDGEAL VPLGPLALPG IGDGLDAAVG TASVRLFAQR
ASAVRPGFAV DATTLPDVVR LVRALDGLPL ALELAAARLR ALPLPDLVAG LSARFRLLAG
GNRAAPPRHR TLRAVIAWSW DLLDGPERAV AERISVLPGG VTPESAAAVC AGAVPADEVP
ELLAALVDRS LLSLVGGRRR MLETVRAYGV ERLAAAGDLS AVRDLAAAHV AGVLAGQDAV
LRGPGQRAAV AAIGAEHDNA VAALHHRCAT GDADGALALA LSLVWYWQVF GRQSEGAHWL
GRALAVPGGP SPERDCARAA HLLGLADGGH GVGDRGEVGA LADRVLAHRG LPGHLRVLGA
VLLFLLGRGE GVFRELGAGG GWLSGLAHLF LAELAENAGE LDRARGHAEV SLDRFRAAGD
GWGVAGVLPV RARARRYDDL DGAWADLREA RALEGEFGAL SPGDRVRADL RWVDLHERRG
DSGAALEVLA AARARGEQVA VVDAREAALR VRLGDLGRAG ELLAGVGGAV GDLARAAYRV
ASGDLAGAER ALRRARVVAA ASGELPALAP VAVGAAALEQ ARGRWAGSGV LLGTAARVRG
AHDRTDPLVR ELVDRGRAAV GGSAFAAAYA RGWEAERDVA AAFVL
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