| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3302 |
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| Symbol | |
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| ID | 8327492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3875783 |
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| End bp | 3877381 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644943814 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003101054 |
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| Protein GI | 256377394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00567592 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGTC AACGCCGATG GGCGCCCATC GCCCTGGCCG TGCTCGGCCT CGTGGCGGCG
AGCCTGACCG CCACCACCAC CCACCCGGCC CGCGCGGCCG GGACCTACAC CAACCCCGTG
CTGTGGCAGG ACTTCGCCGA CATCGACGTC CTGCGCGTGG ACGACACCTA CTACTACTCG
GCCTCCACCA TGCACTACTC GCCCGGCGCG CCCGTGCTGC GCTCCTACGA CCTGGTCAAC
TGGGAGTTCG CCGGGCACTC CGTGCCACGC CTGGACTTCG GGGCCAAGTA CGACATGGGC
AACGGCTCCC GCGCGTACGT CAACGGCATC TGGGCGTCGT TCCTGGCGCA CCGCAAGAGC
AACCGCACCT TCTACTGGGG CGGCTGCGTC GACTTCGCCC AGACGCACCT GTACACCGCG
ACCGCCGTCG ACGGCCAGTG GTCCAAGCAC ACCACCATCA ACAAGTGCTA CTACGACGCC
GGGATGCTCG TGGACGACGA CGACACCCTG TACGTCGCCT ACGGCAACAC CAGCATCAGC
GTCGCCCAGC TCTCCGCCGA CGGGAAGTCG GAGGTCCGCT CCCAGCAGGT GTTCCAGACC
CCCTCGAACA TCGGCACCCT CGAAGGGGCG CGCTTCTACA AGCGCGGCGG CAACTACTAC
ATCTGGCTCA CCAGGCCCGC GAACGGCCAG TACGTGCTCA AGTCGTCCAG CCCGTTCGGC
CCGTACTCGA TCCAGCAGGT GCTGCTCGAC CTGCCCTCGC CGATCCAGGG CGGGGGAGTG
CCGCACCAGG GCGGCCTGGT GCAGACCCAG AACGGCGACT GGCACTACCT GGCGTTCGTC
GACGCCTACC CCGGCGGGCG CGTGCCGGTG CTCGCCCCGA TCACCTGGAC CTCGGACGGC
TGGCCGCGCG TCACCACCGT CAACGGCGGC TGGGGCGCGA CCTACCCGAA GCCGAACCTG
CCCGCGCCCC CGCGCCAGGT CAAACCCATG ATCGGCGCCG ACACCTTCTC CGGCGCCGCG
CTCGGCCCGC AGTGGGAGTG GAACCACAAC CCGGACACCG CCAAGTACAG CGTGAACAAC
GGCCTTCGCC TGTCCACCGC GACCGTCACC AACGACCTGT ACTCCGCCCG CAACACCCTC
ACCCACCGCA TCCAGGGCCC CACCTCCACC GGCACCGTGG AACTGGACCT GTCGGGGATG
CGCGACGGCG ACCGCACCGG GCTGGCCGTG CTGCGCGACT CCTCGGCGTG GATCGGCGTC
AAGCGCGACA ACGGCCGCAA CCGGATCGTC TCCGTCACCG GCCTGACCAT GGACGGCTCC
TGGCGCACCA CCGGAACCGG CTACGAGGTC GCGAGCGCCG ACCTGGGCGG CTCCCGGATC
TGGTTGCGCG CCAACGCCGA CATCCGCCCC GGCAACGGCA GGCAGGCCCG GTTCTCCTAC
AGCACCGACG GCGTCAACTT CACCGCCTTC GGCCCGGCGT TCACGCTCAA GAACGACTGG
CGGTTCTTCA TGGGCTACCG CTTCGCCGTC TTCAACCACG CCACCGCCGC GCTCGGCGGC
TCCGTCACCG CCCGCCGCTT CGACCTCACC ACCCCGTGA
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| Protein sequence | MPRQRRWAPI ALAVLGLVAA SLTATTTHPA RAAGTYTNPV LWQDFADIDV LRVDDTYYYS
ASTMHYSPGA PVLRSYDLVN WEFAGHSVPR LDFGAKYDMG NGSRAYVNGI WASFLAHRKS
NRTFYWGGCV DFAQTHLYTA TAVDGQWSKH TTINKCYYDA GMLVDDDDTL YVAYGNTSIS
VAQLSADGKS EVRSQQVFQT PSNIGTLEGA RFYKRGGNYY IWLTRPANGQ YVLKSSSPFG
PYSIQQVLLD LPSPIQGGGV PHQGGLVQTQ NGDWHYLAFV DAYPGGRVPV LAPITWTSDG
WPRVTTVNGG WGATYPKPNL PAPPRQVKPM IGADTFSGAA LGPQWEWNHN PDTAKYSVNN
GLRLSTATVT NDLYSARNTL THRIQGPTST GTVELDLSGM RDGDRTGLAV LRDSSAWIGV
KRDNGRNRIV SVTGLTMDGS WRTTGTGYEV ASADLGGSRI WLRANADIRP GNGRQARFSY
STDGVNFTAF GPAFTLKNDW RFFMGYRFAV FNHATAALGG SVTARRFDLT TP
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