| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3287 |
|---|
| Symbol | |
|---|
| ID | 8327477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3817176 |
|---|
| End bp | 3818342 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644943799 |
|---|
| Product | Glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_003101039 |
|---|
| Protein GI | 256377379 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATT CTCCGGACGC AGGCATCGAG TTCCCGGCCT GGCCGCAGCA CGACGACGCC
GAGCGCACGG CCCTGCTGCG CGCGCTGGAC CAGGGCCAGT GGTGGCGGGT CGGCGGCAGC
GAGGTCGACG AGTTCGAGCG CGAGTTCGCC GAGTACCACG GCGCGGGCCA CGCGCTCGCC
GTCACCAACG GGACGCACGC GCTGGAGCTG GCGCTCCAGG TGCTCGACGT GGGCCCCGGC
GCCGAGGTGA TCGTGCCCGC CTTCACCTTC ATCTCGTCCT CGCAGGCCGT GCAGCGCCTC
GGCGCGGTCG CCGTGCCCGT GGACGTCGAC CCCGACACCT ACTGCCTGGA CGTCGCCGCC
GCCGAGGCCG CCGTCACCTC CCGCACCTCG GCGATCATGC CCGTGCACAT GGCGGGCCAG
TTCGCCGACA TGGACCGGCT GGACAAGCTG TCCACGAGCA CCGGCGTGCC GGTCCTGCAG
GACGCCGCCC ACGCGCACGG CGCCCACTGG CGCGGCAAGC GGGTCGGCGA GCTCGGGTCG
ATCGCCACGT TCAGCTTCCA GAACGGCAAG CTGATGACGG CGGGCGAGGG CGGGGCCGTG
CTGTTCGAGG ACGAGGCCCA GTGGGAGAAG GCGTTCGTCC TGCACAGCTG CGGCAGGCCC
AAGGGCGACC GCGGCTACTT CCACCTCACC TCGGGCTCGA ACTTCCGGAT GAACGAGTTC
TCCGCCGCCG TGCTGCGCGC CCAGCTCGGC AGGCTGGACT CGCAGATCGC GACCAGGCAG
GCCCGCTGGC CGGTGCTGTC CGCGCTGCTG GCGGGGATCG ACGGCGTCGT GCCGCAGACC
GTCGACCCGC GCAGCGACCG CAACCCGAGC TACATGGCGA TGTTCCGGAT GCCCGGCGTC
ACCGAGGAGC GGCGCAACGC GGTGGTGGAC GAGCTGGTGC GGCGCGGGAT CCCGGCGTTC
ATGGCGTTCC GGGCGGTCTA CCGCACCCAG GCGTTCTGGG AGACCGGCGC GCCCGACCTG
ACCACCGAGG AGCTGGCCGC CCGGTGCCCG GTGTCGGAGG AGATCACCCG CGACTGCGTG
TGGCTGCACC ACCGGGTGCT GCTGGGCACC GAGGAGCAGC TGCACCGGCT TGCCGCCGTC
GTGGCCGACG TGGTCGCGGG CGCGTGA
|
|---|
| Protein sequence | MSNSPDAGIE FPAWPQHDDA ERTALLRALD QGQWWRVGGS EVDEFEREFA EYHGAGHALA
VTNGTHALEL ALQVLDVGPG AEVIVPAFTF ISSSQAVQRL GAVAVPVDVD PDTYCLDVAA
AEAAVTSRTS AIMPVHMAGQ FADMDRLDKL STSTGVPVLQ DAAHAHGAHW RGKRVGELGS
IATFSFQNGK LMTAGEGGAV LFEDEAQWEK AFVLHSCGRP KGDRGYFHLT SGSNFRMNEF
SAAVLRAQLG RLDSQIATRQ ARWPVLSALL AGIDGVVPQT VDPRSDRNPS YMAMFRMPGV
TEERRNAVVD ELVRRGIPAF MAFRAVYRTQ AFWETGAPDL TTEELAARCP VSEEITRDCV
WLHHRVLLGT EEQLHRLAAV VADVVAGA
|
|---|
| |