Gene Amir_3283 details

Gene Information

• Locus tag: Amir_3283
• ID: 8327473
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3813054
• End bp: 3815063
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644943795
• Product: Carbamoyltransferase
• Protein accession: YP_003101035
• Protein GI: 256377375
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2192] Predicted carbamoyl transferase, NodU family

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.503315
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGTGC TCGGGATCAA CGGGAACTTC TCGCCCGCCG AGACCGACCT CGTCCCGTCG 
ATGTCGGAGC TGTTCTTCCA CGACGCGGCA GCGTCCCTGG TGCGCGACGG CGAGCTCGTG 
GCCGCCGTGG AGGAGGAACG GCTCAACCGC GTCAAGAAGA CGACCAAGTT CCCGTCCACC 
GCCATCCGCG AGTGCCTGGC GCTCGCGGGC GCGACCGTGG ACGACGTCGA CGCGGTCGGC 
TACTACTTCC CCGAGGACCA CCTCGACCTG GTGCTCAACC ACGTCTACAC CGAGCACCCG 
AGGGTGCCAC TGCGGTTCTC CCGCGAGCTG ATCAAGCAGC GGCTGCGCGA GGACCTCGGC 
TGGGAGCTGC CCGACGACAA GCTCGTCTAC GTGCCGCACC ACGAGGCGCA CGCCTACTCG 
TCCTACCTGC ACTCGGGCGC GGACGAGGCG CTGGTGGTGA TCTTCGACGG CCGGGGCGAG 
GACAACTCCG GCACGGTCTA CCACGCGCGT GGCGCGCACC TGGAGAAGCT GCACGACTAC 
CCGGTGGAGA AGTCCCTCGG CGGGCTGTAC CTGAACGCCA CGTTCCTGCT CGGCTACGGC 
TTCGGCGACG AGTACAAGGT CATGGGGCTC GCCCCGTCCG GCGACCCGTC GACCTACCGC 
GAGGTCTTCT CCGGGCTGCA CGCGCTGCGC GACAAGGGCG AGTACGACCT GATCGGCAAC 
ACCAAGGTGC CGAACCTGGT CACCCCCGCG CTGGTCGCCG CCGGGTTCCG GCCGCGCCGC 
AAGGACGAGC CGTTCAGCCA GGCGCACCGG GACTTCGCCG CCGCGCTGCA GGAGGCGACC 
GAGAAGATCG CGCTGCACGT GCTCGGGCAC TGGGCCGAGG TCACCGGGCT GCGCACGCTC 
GCGTTCGGCG GCGGCGTCGC CCACAACTCC ACGCTCAACG GCCGCATCCT CAAGGCCGGG 
CTGTTCGACG AGGTGTTCAT CCACCCCGCC TCGCACGACG CGGGCGCCGG CGAGGGCGCC 
GCGTACGCCG CAGCCGCCGC GCTGGGCGTG CTGGAGCGGC CGTCGGCGCG GCTGGTGTCG 
GCGGCGCTCG GGCCGGACCT CGGCACGGAC GAGCAGGTCG CCGCGCGGCT CGCGGACTGG 
TCGCCGGTGG TGGAGGTGAC GCCGCTGGTG GACCCGGTGG AGACCGCGGC GAAGCTGCTC 
GCCGACGGCG AGGTGCTGGG CTGGGCGCAC GGCCGCTCCG AGTTCGGGCC GCGCGCGCTC 
GGGCACCGCA GCATCATCGC CGACGCCCGG CCCGCGGAGA ACCAGACGCG GATCAACGCC 
ATGGTGAAGA AGCGGGAGAG CTTCCGGCCG TTCGCGCCCG TGGTCACCGC CGAGGCCGCG 
CGGGACTGGT TCGACCTGTC CGGGGCGCTG GGGCACCACG AGTTCATGTC GTTCGTGGTG 
CCGGTGCTGC CCGCCAGGCG GGCCGAGCTG GGCGCGGTCA CGCACGTGGA CGGCAGCGCG 
CGCGTGCAGG TCGTCACGCC CGAGTCGGGA GAGCGCTTCC ACCGGCTGGT GGCGCGGTTC 
GGCGAGCTGA CCGGCACCCC GGTGCTGCTC AACACCTCGT TCAACAACAA CGCCGAGCCG 
ATCGCGCAGA GCCTGGACGA CGTGCTCACC AGCTTCCTGA CCACCGGCCT GGACGGCCTG 
GTCGTGGAGG GCTTCCTGGT GCGGGCCCGC CCCGAGCAGG ACCTGGGCGC GCTGGTGCCC 
AGGCTGCGCC CGGTGACCCG CCTGGCCGTG CGCACCGCGC CCGCGCCGGG CAGCGCGGCG 
GCGGGAGAGC CGGTGCACGA GGTGTCGCTG GAGTACGACC ACGGGCCCGT CACCGCCACC 
ACCGCGCAGG CGCACGCGCT GCTCAGCCGG GTGGACGGCG TGACGACCCT GGCGGAGCTG 
GTCGGCGGCG CGCCGTCCGA GGAGTTGACG CGCGAGCTGC GCCGGTTGTG GCAGGGTCGG 
TTCGTCGAAC TCATCCCGGC CCTCGGCTGA 

 

Protein sequence

MLVLGINGNF SPAETDLVPS MSELFFHDAA ASLVRDGELV AAVEEERLNR VKKTTKFPST 
AIRECLALAG ATVDDVDAVG YYFPEDHLDL VLNHVYTEHP RVPLRFSREL IKQRLREDLG 
WELPDDKLVY VPHHEAHAYS SYLHSGADEA LVVIFDGRGE DNSGTVYHAR GAHLEKLHDY 
PVEKSLGGLY LNATFLLGYG FGDEYKVMGL APSGDPSTYR EVFSGLHALR DKGEYDLIGN 
TKVPNLVTPA LVAAGFRPRR KDEPFSQAHR DFAAALQEAT EKIALHVLGH WAEVTGLRTL 
AFGGGVAHNS TLNGRILKAG LFDEVFIHPA SHDAGAGEGA AYAAAAALGV LERPSARLVS 
AALGPDLGTD EQVAARLADW SPVVEVTPLV DPVETAAKLL ADGEVLGWAH GRSEFGPRAL 
GHRSIIADAR PAENQTRINA MVKKRESFRP FAPVVTAEAA RDWFDLSGAL GHHEFMSFVV 
PVLPARRAEL GAVTHVDGSA RVQVVTPESG ERFHRLVARF GELTGTPVLL NTSFNNNAEP 
IAQSLDDVLT SFLTTGLDGL VVEGFLVRAR PEQDLGALVP RLRPVTRLAV RTAPAPGSAA 
AGEPVHEVSL EYDHGPVTAT TAQAHALLSR VDGVTTLAEL VGGAPSEELT RELRRLWQGR 
FVELIPALG