Gene Amir_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3249 
Symbol 
ID8327439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3785424 
End bp3787232 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content73% 
IMG OID644943762 
Producthypothetical protein 
Protein accessionYP_003101002 
Protein GI256377342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGGGC AACTGGCCGC GCTGGCCCGC GAGGGTGACA AGGCCGCGCT GAAGCTGTTG 
GCGGAGCTGG ACTCCGCACC GGCCCGCGCC GAGTTCGGCG CGCTCAAGCG CTTGATGTCC
GGGCACAGCG TCTCCATCCG TGCCGCGCTG GACCGCTCGG TGGGCGCGTC GGCGCGAGGG
CTGGGCCTGC TCTCGCGGGC GGTCACCCGC TCCACCGGGG CGCTGACCGC GCACACCACG
GCGGTCGGCG GCGCGCCCCT GAAGTACACG TCGATGGCCG CCGCGCTGAG CGAGACGGTG
GGGCTGGTGG GCGGGCTCGG CGCGGCGGCC GGGACCGCCG CGGGCTCGTT GCTGGTGCTG
CCCGCGGCCG GGATCGCCGC CGCCGCCGTC GCGGTCAAGA CGCTCACGCT CGGCGTGGAG
GGCCTGGGCG ACGCGCTCAA GGCGGAGAGT CCCGAGGAGT ACGCGAAAGC GATCGAGCGG
TTCGCGCCGC CGATGCGCGA GACCGCCGAC GCCGCGCGGG CCCTCAAGCC GGAGCTGGAC
GGGCTGCGCC TGGACGTGCA GTCGAGCCTG TTCGCCGGAC TCGGACAGCA GGTCAATGGG
CTCGGGCAGC GCTACCTGCC GATGCTGCGC CGGGAGCTGT CCTCGATCGC GGGCGGCTAC
AACGCCGCCG CGCTCAAGGC CGGCTCCTTC GCCGAGCGGG CGGGCACCGC CGAGGACGTG
CGGCACGTGC TGGGCAACAC CTCCACCGCC GTGCGCCAGC TCTCCGAGGC GGCCATCCCG
CTGGTGGCCG CGCTCATCGA CGTCTCGGTG GTGGGCAGCG ATTTCCTGCC CGGCTTCGCC
ACCCGCGTGG GCGAGTCCAC CACCCGGCTG GCCTCGTTCA CCTCCGCCGC CCGCGAGTCC
GGCCAGCTGA ACACCTGGCT GGACAACGGG TTCAACGCGG TGGGCGACCT GGGCACGATC
CTGGGCAACC TCGCTTCCTC CCTGTTCGCG GTCCTGTCGG CGGCCAACTC CCAGGGAGCG
GGCCTGCTGG GCACGTTGGC GGCGCTGTCC GAGGGGATGG CGAATTATCT GCGCTCGGCG
CAGGGCGCGG GTGTGCTCGA TCAGGTCTTT GGCGGTCTGC ACGCCGCAGT CGTGGGCGCG
GCGCCGCTCG TCGTGGTCCT GGGCCAGCTC TTCGCCGGGG TCCTCGCGCC CGCGATCGCC
CAGCTCGGCC CCGTGGTCGG CCAGGCGCTC GGGTCGATGG CACCCGCTCT CGAACCGGTC
GCGAAACTCC TGCTGGCGCT GGTGCCGTTG CTGGCCACCG TCGCCCAGGT CGCGGCCTCG
CTGTTCGTGC CAGCCCTGGG GCTGCTCGCC GGTCTGGTCG ACGCGCTGGC ACCGGCCCTG
CGCCAGGTCG TCGCCGAGGT CGTCGGGCAC GGCCTGGTCT CCGGGATCAC CAGCCTGACC
CCCGACCTGG TCGGGATGGC GCAGAGCCTG GCCCCACTGA TCATCCTTTT TGGACAGTTC
GTCTCGCAGG TCCTCCGGGT CCTGGCCCCG CTGTTCGCGC AGCTGCTCAC CGTGGCCACG
CCCGTGGCCG ACCTGCTCGG CAGGAACCTG CTGGCGGCGC TGTCGGCCCT GCTGCCGCTG
GCCCTCGTGC TCGTCACCAC CCTGGGCAAA CTGCTCGACG CCGCGCTACG CCCCCTGCTG
CCGGTGCTGC CGGTACTGCT CGACGGGATC GTCCAGCTGG GCTGGGCGCT GACCACCGGG
CTCTCGGCCG CCACACCGCC CTCGTCCAAA TCGGACAGTT GCTCGGTGAT GTGCTGGGCG
AGACCTTGA
 
Protein sequence
MRGQLAALAR EGDKAALKLL AELDSAPARA EFGALKRLMS GHSVSIRAAL DRSVGASARG 
LGLLSRAVTR STGALTAHTT AVGGAPLKYT SMAAALSETV GLVGGLGAAA GTAAGSLLVL
PAAGIAAAAV AVKTLTLGVE GLGDALKAES PEEYAKAIER FAPPMRETAD AARALKPELD
GLRLDVQSSL FAGLGQQVNG LGQRYLPMLR RELSSIAGGY NAAALKAGSF AERAGTAEDV
RHVLGNTSTA VRQLSEAAIP LVAALIDVSV VGSDFLPGFA TRVGESTTRL ASFTSAARES
GQLNTWLDNG FNAVGDLGTI LGNLASSLFA VLSAANSQGA GLLGTLAALS EGMANYLRSA
QGAGVLDQVF GGLHAAVVGA APLVVVLGQL FAGVLAPAIA QLGPVVGQAL GSMAPALEPV
AKLLLALVPL LATVAQVAAS LFVPALGLLA GLVDALAPAL RQVVAEVVGH GLVSGITSLT
PDLVGMAQSL APLIILFGQF VSQVLRVLAP LFAQLLTVAT PVADLLGRNL LAALSALLPL
ALVLVTTLGK LLDAALRPLL PVLPVLLDGI VQLGWALTTG LSAATPPSSK SDSCSVMCWA
RP