| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3218 |
|---|
| Symbol | |
|---|
| ID | 8327408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3750581 |
|---|
| End bp | 3751756 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644943732 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003100972 |
|---|
| Protein GI | 256377312 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGAG TCGTGAAGTG GTGGCCGCTC GTCGTGGTGT CGGGCCTGCT GGCCGCGCAG
GCGTGGGTCG GGTGGCCGCT GGGCCTGCGC GGCGCGCTCG TGCTGTGCCT CCTCGCCGCG
GTGTGCGCGG CGGCGCTCCT CGCGTCGCGG TGGCCCGCGC CCGCCACGGC GGTGGCGCTG
GGGGCCTCGT TCGCGGTCAC CGGGATCTTC GCCGGGTTCA CCCGCGCCCT CCTGCTGCCC
GGCGCGGGGG TGGCCGGCGT GGACGGGTTC GAGTGGCCGC TCGGGCCGCT GACCTTCCCG
GAGACGGTCG CGTTCGCCGT GCTGCTCGCC TCGGTGGTCC GGGTCGCGCG TCCGCGCGTC
GCGGCGGGGT GCGTCGCGGC CCTGGCGCTG CTGCTCGCGC ACGCGCTCAG GGTGCGCGGG
GTCGAGGGGG TGTTCGAACG CCTGCCGGAC GGCTCGGTGC GCCCCTTCGC GGGCGGGTGG
GCGGTGATCG GGCTGCTGCT GGCGCTGGCC GTGCTCGTCG GGCTGCTGCT GCGCTCGCAC
GACCGGGAGC GCGCCGTCGC GCTGGAGCGG GTGCGGGTGG AGGAGCGCCT GGACATCGCG
CGCGAGCTGC ACGACGTGGT GGCGCACCAC GTGACCGGGA TGCTGGTGCA GGCGCAGGCC
GCGCTCGTGG TGGGGGAGCG GGACCCGGAC GCCGCGCGGC GCGCGCTGCC CGCCATCGTG
GACGGCGGGA CGGACGCGGT CGGCGCGATG CGCAGGCTCG TGGGGGCGTT GCGCGGCAAG
GAGGACGCGG CGACCGCCGA CCTGGAGGCC GACCTGCGGG CGCTGGTGGG GCGGGCGCGC
GAGTCCGGGC TGCCGGTGCG GGTGGCGGTC GAGCTGCCCG CGCCCGTGCC GCCGGAGCTG
GGGCGGTCGG TGCTGCGCCT GGTGCAGGAG GGGCTGACCA ACGTGCGCAA GCACGCCCGC
GACCCCGGCG AGGTGGTGGT GGAGGTGGTG CGCGAGCCGA CGGTCGTCAC GGTGTCCGTC
GTGGACTGCG GGGAGCCGGC TTCCTTCGGC AGGGGCGGTT TCGGGATCGT GGGGATGCGC
GAGCGGGTGG AGCTGCTCGG CGGGCGGTTC CACGCCGGGC CCACGCCCGG CGGCTGGGTC
GTGTCGGCCG AGCTGCCCCT GGTGGTGCGG GCGTGA
|
|---|
| Protein sequence | MPGVVKWWPL VVVSGLLAAQ AWVGWPLGLR GALVLCLLAA VCAAALLASR WPAPATAVAL
GASFAVTGIF AGFTRALLLP GAGVAGVDGF EWPLGPLTFP ETVAFAVLLA SVVRVARPRV
AAGCVAALAL LLAHALRVRG VEGVFERLPD GSVRPFAGGW AVIGLLLALA VLVGLLLRSH
DRERAVALER VRVEERLDIA RELHDVVAHH VTGMLVQAQA ALVVGERDPD AARRALPAIV
DGGTDAVGAM RRLVGALRGK EDAATADLEA DLRALVGRAR ESGLPVRVAV ELPAPVPPEL
GRSVLRLVQE GLTNVRKHAR DPGEVVVEVV REPTVVTVSV VDCGEPASFG RGGFGIVGMR
ERVELLGGRF HAGPTPGGWV VSAELPLVVR A
|
|---|
| |