| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3215 |
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| Symbol | |
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| ID | 8327405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3746657 |
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| End bp | 3747973 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943729 |
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| Product | glycoside hydrolase family 6 |
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| Protein accession | YP_003100969 |
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| Protein GI | 256377309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGTA TCGGGAAAGC AGCAGCGTGC GCGTTCTCCG CCGCGCTCGT GGCGGGCGCG
GCCGTCCTGG TGACCGGGGG CGGGCAGACC GCCACCGCCG CCGACTCGGC GTTCTACACC
GATCCGGGGA GCTCCAGCGC GAGGTGGGTG GCGGCCAACC CGAACGACTC GCGCGCGGCG
GTCATCCGCG ACCGGGTCGC CTCGGTGCCG CAGGCGAAGT GGTTCACCAC CACCAACACC
TCGACCGTGC GCTCGGAGGT CAGCGCCTTC GTGGGCGCGG CGGCCTCGGC CGGGAAGATC
CCGATCCTGG TCGTCTACAA CATCCCCAAC CGGGACTGCG GCGGCGCCAG CGGCGGCGGC
GCGCCGTCCC ACCAGGCCTA CCGGGCGTGG GTGGACGAGG TCGCGGCCGG GCTCGGCGGA
CGACCGGCGT CGATCATCCT GGAACCGGAC GTGCTGCCGA TCATGTCCAA CTGCCAGAGC
GCGGACCAGC AGAACCAGAC CAAGGCGTCG ATGTCCTACG CGGGCCGCAA GCTCAAGTCC
GGCTCCGGGC AGGCGAAGGT CTACTTCGAC ATCGGCAACT CCGACTGGCT CGCGCCCGCC
GAGGCCGCGA ACCGGCTGCG CGGGGCCGAC GTGTCCGGCA GCTCCGACGG CATCGCCAGC
AACGTCTCCA ACTACCGCGC CACCCAGGCC GAGGTCTCCT ACACCAAGGC GATCCTGAAC
GCGCTGGGCG ACGGCAGGCT CAAGGCCGTC ATCGACACCA GCCGCAACGG CAACGGGCCG
CTCGGCAGCG AGTGGTGCGA CCCGCCCGGT CGCGCCATCG GCACGCCCAG CACGAAGAAC
ACCGGCGACT CGCAGATCGA CGCCTTCCTG TGGGTCAAGA TCGTCGGCGA GGCGGACGGG
TGCATCGCGA GCGCGGGGCA GTTCGTGCCG CAGCGCGCGT ACGACCTGGC GGTCGCGGCG
GGGCCCGTGC CCACGACGAC GACCACCACG CCGGGGGGCA ACCCCGGCGG CGGCTGCGCG
GTGACGCACC GCGTGGTCAG CCAGTGGAAC GGCGGGTTCA CCGGAGAGGT CGTCGTGGAG
AACAGGGGGC CCGCGATCTC CTCGTGGACC CTGGAGTTCT CCGCGCCCGG TGTGACCGTC
ACGCAGGGGT GGAACGGGAC GTGGACCGAC ACCGGCGACG GGGTCCGGGT CGTGAACACC
GCCTGGAACG GAGCGCTCGC GTCCGGCGGA CGGGTGACCG CCGGGTACAA CGCGAACTAC
GGTGGCGGCG CACCGCCGTT CTCGTCGCCG ACGCTGAACG GCGCCGCCTG CTCGTGA
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| Protein sequence | MASIGKAAAC AFSAALVAGA AVLVTGGGQT ATAADSAFYT DPGSSSARWV AANPNDSRAA
VIRDRVASVP QAKWFTTTNT STVRSEVSAF VGAAASAGKI PILVVYNIPN RDCGGASGGG
APSHQAYRAW VDEVAAGLGG RPASIILEPD VLPIMSNCQS ADQQNQTKAS MSYAGRKLKS
GSGQAKVYFD IGNSDWLAPA EAANRLRGAD VSGSSDGIAS NVSNYRATQA EVSYTKAILN
ALGDGRLKAV IDTSRNGNGP LGSEWCDPPG RAIGTPSTKN TGDSQIDAFL WVKIVGEADG
CIASAGQFVP QRAYDLAVAA GPVPTTTTTT PGGNPGGGCA VTHRVVSQWN GGFTGEVVVE
NRGPAISSWT LEFSAPGVTV TQGWNGTWTD TGDGVRVVNT AWNGALASGG RVTAGYNANY
GGGAPPFSSP TLNGAACS
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