| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3196 |
|---|
| Symbol | |
|---|
| ID | 8327386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3704178 |
|---|
| End bp | 3705344 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644943713 |
|---|
| Product | Glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_003100953 |
|---|
| Protein GI | 256377293 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACCTGA AGGCCCCGCA GAAGCTGGAG TTCCCCGCCT GGCCGCAGTT CGACTCGACC
GAGCGCGAGG CCCTGCTGCG CACGCTCGAC AGCGGCCGGT GGTGGCGGAT CACCGGGGAC
GAGGTCGTCT CGTTCGAGCG GGAGTTCGCG CAGGCCCACG GGGCCCGGCA CGCGCTCGCC
GTGACCACGG GCACGCACGC CCTCGAACTC GTCCTGGAGG TCATGGGCGC CGGGCCCGGC
GCCGAGGTGA TCGTGCCCGC GTTCACCTTC ATCTCCTCCT CGCAGGCCGC CCAGCGGCTC
GGCGCGGTCG TCGTCCCCGT CGACGTCGAC CCGGACACCT ACTGCGTCGA CCCGGCCGCC
GTGCGGGCCG CGATCACCGA GCGCACCAGG GCGATCATGC CCGTGCACAT GGCAGGCCAG
CTCGCCGACA TGGACGCGCT GCGCGCCCTC TCCGCCGAGA CCGGCGTCCC GCTCCTCCAG
GACGCCGCGC ACGCCCACGG CGCGCGGTGG CGCGGCGAGC CCCTCGGCGC GCTCGGCTCG
ATCGCCGCCT TCAGCTTCCA GAACGGCAAG CTGATGACCG CGGGCGAGGG CGGGGCCGTG
CTGCTCCCGG ACGGGGACCA GCACGAGGAG GCGTTCCTGC GGCACGCCTG CGGGCGCCCG
CTCGCCGACC GGGCCTACCA CCACCGCACG GCCGGGTCGA ACTTCCGCAT GAACGAGTTC
TCCGCCGCCC TGCTGCGCGC CCAGCTCGGC AGGCTCCAGC AGCAGACCGA CGTGCGCGAG
CGGCACTGGC CCGTGCTGGC CCGGCTGCTC GCCGAGGCGC CCGGCGTCGT CCCGCAGGGG
ACCGACCCGC GCTGCGACCG CAACCCGCAC TACATGGCCA TGTTCCAGGT CCCCGGCATC
GGCGAGGAGC GCCGCGCCCG CCTGGTCGAC GCGCTGGTCG AGCGCGGCGT CCCGGCGTTC
GCCGGGTTCC GCGCGATCTA CCGCACCGCC GCGTTCTGGG AGCGCTCCGC CCCCGACACC
ACGGTGGACG CCCTCGCCCG CGCCTGCCCG GTCACGGAAG CGCTGAGCAG CGACTGCGTG
TGGCTGCACC ACCGGGTGCT GCTGGGGACC GAGGAGCAGA TGCCGCTGGT GGCGGAGGCC
GTCGCCGACG CGCTGGAGGA GGTCTGA
|
|---|
| Protein sequence | MHLKAPQKLE FPAWPQFDST EREALLRTLD SGRWWRITGD EVVSFEREFA QAHGARHALA
VTTGTHALEL VLEVMGAGPG AEVIVPAFTF ISSSQAAQRL GAVVVPVDVD PDTYCVDPAA
VRAAITERTR AIMPVHMAGQ LADMDALRAL SAETGVPLLQ DAAHAHGARW RGEPLGALGS
IAAFSFQNGK LMTAGEGGAV LLPDGDQHEE AFLRHACGRP LADRAYHHRT AGSNFRMNEF
SAALLRAQLG RLQQQTDVRE RHWPVLARLL AEAPGVVPQG TDPRCDRNPH YMAMFQVPGI
GEERRARLVD ALVERGVPAF AGFRAIYRTA AFWERSAPDT TVDALARACP VTEALSSDCV
WLHHRVLLGT EEQMPLVAEA VADALEEV
|
|---|
| |