Gene Amir_3193 details

Gene Information

• Locus tag: Amir_3193
• ID: 8327383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3700424
• End bp: 3702436
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644943710
• Product: Carbamoyltransferase
• Protein accession: YP_003100950
• Protein GI: 256377290
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2192] Predicted carbamoyl transferase, NodU family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGTGC TCGGCCTGAA CGGCAACTTC TCGACCGCCG CCGAGGAGCT GGTGCCGGGG 
ATGCTGGAGT TCTTCTTCCA CGACTCGTCG GCGAGCCTGG CGCGCGACGG CGAGCTGCTG 
GCCGCCGTGG AGGAGGAGCG GTACAACCGG ATCAAGAAGA CCACCCGGTT CCCCAGCGCG 
GCCGTGCGGG CCTGCTTCGA GGAGACCGGG CTGGGGCCCG AGGACGTGGA CGCGGTGGCG 
TTCTACTTCC CCGAGGACCA CGTGGACAAG GTACTCGGCC AGCTCTACTG CCAGAGCCCC 
GCCGTGCCGC TGCGGTACTC GCGCGACCTG GTGCGCGACC GGCTGCGCAG CGAGCTGGGC 
TGGGACCTGC CGCCGGAGAA GCTGCACTAC GTGCCGCACC ACCTGGCGCA CGCCATGTCC 
TCCTTCGGGC ACTCCGGGTT CGAGTCGGCG CTGACCGTCG TGTTCGACGG CCGGGGGGAG 
AACGCGTCCG GGACCGTCTA CCGGATCGGG CCCGGCGGGG TCGAGTCGCT GGCCTCGTAC 
CCCGTGCACC AGTCGCTGGG GTTCTGGTAC CTGTTCGGCA CGCAGCTGCT CGGCTACGGC 
TTCGGCGACG AGTACAAGGT GATGGGGCTG GCGCCCTACG GCGACCCGGC CCGCTACCGG 
TCGGTGTTCG AGTCGCTGTG CTCGCTGGGC GAGGGCGGTG GGTACGAGCT GCTGGGCAAC 
GTCGTCACGC CCAACGCCTT CCTCCCCGCG ATGCTCGACA CCGGGTTCGC GCCGCGCCGC 
AAGGGCGAGG AGTTCACCCG GGACCACAAG GACTTCGCCG CCGCGCTGCA GGAGACCGTG 
GAGCGGATCG CGCTGCACGT GATCCGGCAC TGGGCCGAGC GGACCGGTGA GCGCGCGCTG 
TGCTTCGGCG GCGGGGTCGC GCACAACTCC AGCCTCAACG GGGTGATCCT GCGGTCGGGG 
CTGTTCGACC GGGTGTTCGT GCACCCCGCG TCGCACGACG CGGGCGCCGG GACCGGGGCC 
GCCCTGGCGG TGGAGCACCG GCTCACCGGG CGGGTGCCCC GCGTGGCGCT TCGCAGGGCC 
GACCTCGGCG GTGGGCTCGG GGACGAGCGG GACGTCGTGC TCAAGCTCAA GGGCTGGGAC 
GGGTTCGTCG AGCTGGTGCA CCGGGCGGCG GACCTGGAGG ACCTGGTGGA CACCTCGGCC 
CGGCTCCTCG CGGACGGCGC GGTGCTCGGG TGGGCGCGCG GGAGGTCGGA GTTCGGGCCG 
CGCGCGCTGG GCAGCCGCAG CATCGTCGCC GATCCCCGGC CCGCCGCGAA CCAGACCAGG 
ATCAACGCGA TGGTGAAGAA GCGGGAGAGC TACCGGCCGT TCGCGCCCGT GGTCACCCCC 
GACGCCGCCG CCGAGTACTT CGAGATCCCG GACGTCGAGG CCGAGCTGGG GTTCATGTCG 
TTCGTGGTGC CGGTGCGGCC CGAGCACCGG GCTGGGCTGG GCGCGGTGAC CCACGTGGAC 
GGCACCGCGC GCGTGCAGGT GGTGACCTCG ACGGCGAACC CGGCGTTCCA CCGGCTGGTG 
GAGCGGTTCG GCGAGCTGAC CGGCACGCCG GTGCTGCTGA ACACCTCGTT CAACAACCAC 
GCCGAGCCGA TCGTGCAGAC CTTCGAGGAC GTGCTGACCA GCTTCCTGAC CACCGAGCTG 
GACTACCTGG TGGTCGGCGA CTCGGTGGTC CGCAGACGCC CGGACTTCCT GGGCGCGCTG 
GACGACGCGG TGATCCGGTT CCGCCCGGAG ACCAGGGTGG TGGGCCGGGT GCGGTTCCCG 
GTCGGTGGTG GTCGGGTGGA GGAGCACGAG GTCTTCCTGG ACTACGCGGA GGGCCCGCGC 
AAGGCGATCT CCGCGCGAGC GCACGGGCTG CTGACGCGGG TGGACGGGAA GAGCGCGGTG 
GCCGAACTGG TGGACGGCGA GGTGGACGAC GCCCTCCGGC AGGAGGTCCT CGACCTGTGG 
ACCGACCGCT ACTTCACGCT GGGGCCCGCT TAG 

 

Protein sequence

MLVLGLNGNF STAAEELVPG MLEFFFHDSS ASLARDGELL AAVEEERYNR IKKTTRFPSA 
AVRACFEETG LGPEDVDAVA FYFPEDHVDK VLGQLYCQSP AVPLRYSRDL VRDRLRSELG 
WDLPPEKLHY VPHHLAHAMS SFGHSGFESA LTVVFDGRGE NASGTVYRIG PGGVESLASY 
PVHQSLGFWY LFGTQLLGYG FGDEYKVMGL APYGDPARYR SVFESLCSLG EGGGYELLGN 
VVTPNAFLPA MLDTGFAPRR KGEEFTRDHK DFAAALQETV ERIALHVIRH WAERTGERAL 
CFGGGVAHNS SLNGVILRSG LFDRVFVHPA SHDAGAGTGA ALAVEHRLTG RVPRVALRRA 
DLGGGLGDER DVVLKLKGWD GFVELVHRAA DLEDLVDTSA RLLADGAVLG WARGRSEFGP 
RALGSRSIVA DPRPAANQTR INAMVKKRES YRPFAPVVTP DAAAEYFEIP DVEAELGFMS 
FVVPVRPEHR AGLGAVTHVD GTARVQVVTS TANPAFHRLV ERFGELTGTP VLLNTSFNNH 
AEPIVQTFED VLTSFLTTEL DYLVVGDSVV RRRPDFLGAL DDAVIRFRPE TRVVGRVRFP 
VGGGRVEEHE VFLDYAEGPR KAISARAHGL LTRVDGKSAV AELVDGEVDD ALRQEVLDLW 
TDRYFTLGPA