Gene Amir_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3172 
Symbol 
ID8327362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3661299 
End bp3661895 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content75% 
IMG OID644943689 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100929 
Protein GI256377269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC CACCGGGCCG TCGCGAGCGC AAGAAGGCCG CGACCCGTCA GAAGATCGCC 
GACACCGCCC TGCGCCTGTT CCTGGAGCGC GGCTACGACG CGGTCGGCAT CCGCGACGTC 
GCGGCCGAGG CCGACGTCGC CGTCACCACG GTCTTCGCGC ACTTCGACAG CAAGGAGGCC 
CTGGTCTTCG AGCGCGACGC CGACTTCGAG CACCGCCTGG TCCGGGCCGT CGCCGAGCGC 
GGGCAGGGCG ACCTCGTCCC CGCCCTGCGC CACGAGGTTC ACGCGATCGT GCGGCACTGC 
ACCACCGACG GGGCGGCCGA GCTGGGGGAG CTGATCGGGT CCTCACCGGA CCTGCGCGCC 
TACAACGAGG CCATGTGCGC CCGCCACGCC GCCTCCCTCG CGACCGCCAT CGCCGCCGAC 
CTCGGCCTGC CGCCGCGCAC CACGGCCTGC CGGGCGATCG CCCGCTTCGC CGTCGACGCC 
CACGTCCTCG CCCGCGAGGC CCGTGACCCC GAGGCCGCCG TGGACGAGGT CTTCCGCATG 
ATCCAGGCCG CCTGGGACGC CGCCGACCTC CACGCGGACG CGCCGCAGGA CCGCTGA
 
Protein sequence
MTAPPGRRER KKAATRQKIA DTALRLFLER GYDAVGIRDV AAEADVAVTT VFAHFDSKEA 
LVFERDADFE HRLVRAVAER GQGDLVPALR HEVHAIVRHC TTDGAAELGE LIGSSPDLRA 
YNEAMCARHA ASLATAIAAD LGLPPRTTAC RAIARFAVDA HVLAREARDP EAAVDEVFRM 
IQAAWDAADL HADAPQDR