Gene Amir_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3163 
Symbol 
ID8327353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3654551 
End bp3655276 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content74% 
IMG OID644943680 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003100920 
Protein GI256377260 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.384554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTTCT CACCCCGGAA TGCCCTGTTA TCCGCGCTGC TCGTCCTGGT CACAGCCCTG 
CTCGGGTCCC TGCTGGTCGC CCCCGGCGTC GCCGCCGCCG AGTCGAACGG CGGCACCCGC
GTCATGCCGC TCGGCGACTC GATCACCGAC GGGTGGAACG TGCCCGGCGG CTACCGGGTC
GGCCTGTGGC GCAGGCTGGT CGACGAGGGC TACTCGGTGG ACTTCGTCGG CTCGGGCTTC
AACGGGCCGC CGGAGCTCGG CGACCACGAC CACGAGGGCC ACCCCGGCTG GCGCATCGAC
GAGATCCACG CCAGGGTCGA CGGCTGGCTG CGCGCCACCA GACCCAGGGT GGTGCTGCTG
CACATCGGCA CCAACGACAT CGGGCAGGAC TACGACGTCG CGAACGCCCC GGCCAGGATG
CGCGCGCTGC TCGACCGCGT CCAGCTCGCC GCGCCCTCGG CGTGGGTGTT CGTCGCCCGG
ATCACCCCGA TCGACGACCC GGTGCTGGAG GCGCGGGTGC TGGCGTTCAA CGCCGCGCTG
CCGGGCGTGG TGGCGGACCG GCGGCGGGTG CGGCTGGTCG ACATGCACGA CGGGTTCGTC
CCCGGCGACC TCGCCGACGG CGTGCACCCG TCCACCGCGG GCTACGACAA GATGGCCGCG
CGCTGGCGGG CCGCCCTGGC CGCCGTTCCG GAGAGCCTGC CGAGGACCCC GGTCCTGACG
GGCTGA
 
Protein sequence
MGFSPRNALL SALLVLVTAL LGSLLVAPGV AAAESNGGTR VMPLGDSITD GWNVPGGYRV 
GLWRRLVDEG YSVDFVGSGF NGPPELGDHD HEGHPGWRID EIHARVDGWL RATRPRVVLL
HIGTNDIGQD YDVANAPARM RALLDRVQLA APSAWVFVAR ITPIDDPVLE ARVLAFNAAL
PGVVADRRRV RLVDMHDGFV PGDLADGVHP STAGYDKMAA RWRAALAAVP ESLPRTPVLT
G