| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3156 |
|---|
| Symbol | |
|---|
| ID | 8327346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3642738 |
|---|
| End bp | 3643904 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644943673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003100913 |
|---|
| Protein GI | 256377253 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA GTCTTCAGGC CTATGTGATA CCCGTCGCTA GCCTGCTGTC GATCAGCTAT
CTGGCCACGC TGCTGAAGCA GCGGCGAAAC CGCAAGCAGG CGATCATGAG CCACCGGACC
GTCCAGGTGA TGCTGCTCGG GCTGCCGGAA TCGGGCAAGA CCGTCCTGTT CGCCGCGGTC
TACCGCGCAC TGGCCTACGG GGGCCGCGAC CAAGTGGTGC TTAAAGCGGA TGACAACACC
GCACCCCACG TGCTGGAACT GACCACAGCG CTGGAGCAGC CAGGGGTGGA ACTGCCACCG
AGCAACCAGC TCGGCACCTC GGTCGACCTG GACTTCACCT TCGTGGTCAA GGATGCCGAT
GGCACAACCC GCGATGTGTG CGGCCTGAGC TTCCTCGACT ACGCGGGCGA GCACGCGAAC
AGGCTGCTGC ACCCCGGCGA GGCGGAACCG TCCAAGGAGG TGCTCGAGTC GCTGGACCGA
GCCGACGTGC TGATGGGCGT CCTCGACGGG AAGCGAGTGC TGGAGGTCAT GAAGAACGGG
AAGGACCCGA AGTTCTTCCC GGAACTGAGC GAGTTGATCC TGCTGCTGAC CCATGCACCG
CAAAAAGTGG TGCACTTGGT CATCACCAAG TGGGACTTGA TCGCCGAGCT GCACACACTG
GCCGAGGTGG TGGAACGCCT CAACCGGTTC CCACCGTTCC AGCAGTTCCG CGACCAGTGC
GGCGGTGTGC TGCGGATCAT CCCGGTGAGC GCGTTCGGGA TGAACGGCTA CCTGTCGCAC
GACGTGGACG GGAAGGCGCT CAAGGCCGAG GAGCGCGGGC TGCACTGGGA GCCGTTCAAC
GCGGCCACCC CCTTCGCGCA CGCGCTGCGC GACGTGCTGG AGGCCAACGT GGAACGGCTG
CGCGCGAACC AGGAGAAGGC TTCCGCAGGG GACTACCCCG CCTTCTTCCT GTCGGTGGGG
GCACTACTGG GCATGATCAC GATCTCGTTC CCGCTGCTCC CCGGCGGGGA GGTGCAGGTC
GAGCTCAGGC CAGGGCAGGG TGGTGGCGAC TCTCCTCATC GGACAGCGGA CCGCGAGCGG
CAGGACCTGG ACAAGGTGGT GCGCTACCTG CGCAGGCTCT CGGACGACGG GGTGTCGAAG
AACCTCAAGC ACCGGGAGCG CCCGTGA
|
|---|
| Protein sequence | MTESLQAYVI PVASLLSISY LATLLKQRRN RKQAIMSHRT VQVMLLGLPE SGKTVLFAAV
YRALAYGGRD QVVLKADDNT APHVLELTTA LEQPGVELPP SNQLGTSVDL DFTFVVKDAD
GTTRDVCGLS FLDYAGEHAN RLLHPGEAEP SKEVLESLDR ADVLMGVLDG KRVLEVMKNG
KDPKFFPELS ELILLLTHAP QKVVHLVITK WDLIAELHTL AEVVERLNRF PPFQQFRDQC
GGVLRIIPVS AFGMNGYLSH DVDGKALKAE ERGLHWEPFN AATPFAHALR DVLEANVERL
RANQEKASAG DYPAFFLSVG ALLGMITISF PLLPGGEVQV ELRPGQGGGD SPHRTADRER
QDLDKVVRYL RRLSDDGVSK NLKHRERP
|
|---|
| |