| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3154 |
|---|
| Symbol | |
|---|
| ID | 8327344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3640512 |
|---|
| End bp | 3641660 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644943671 |
|---|
| Product | Ricin B lectin |
|---|
| Protein accession | YP_003100911 |
|---|
| Protein GI | 256377251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGGT CGGTGGTCCC GCGCCGCTGC GCGCCGCGTC GTCTGAGACG CACGGGGGCG
CTGCTGGCGG CGCTGTGCGC CACGGCGGGC CTGGTCACCG GCACCGCGTC CGCCGAGGTG
GCGGGGGCCG TGGTGGGCCG GGTGTGGTTC GACCGCGACG GCGACGGCGC GCGCGACCCG
GAGGAGCCCG GCCGGGCCGG GGTGGTGGTG CACGCGCTGG GCGTCCTGGC GTTCCGGACG
ACCACGGACG TCAACGGCGA GTTCCGCGTC CCGCACCTGC CGGTGGGGGA GTACCGGCTC
ACCGCCGAGT CCGAGGGCTA CGAGGTGATC GGGGCGCGCG AGGTCGTCGT CCAGGTCGGC
GCCGAGCCGG TGGACGTCGG GTTCGCCCAG CGGGGCGGGG AGATCAGCGG GTACGGCTGG
TGGGACAGCA GCGGCAGCGG GGCCTTCGAC TCGGGCGAGG GCGTGGTCGC GGCCACCTGG
AAGATCGCCG GGTTCAGCGA CTACGAGGGC TGGGTGAGCA GGCAGGTCTC CGCCCCCGGC
CAGTACGCGT TCCGCGACCT GCCCGCCGGG GTGTACCGGG TGGAGGTCGA CGGCCCCGGC
TGGCCGACGA AGTACCGCGC GGACAAGGAC ATGCGCAACT CCGACGTCCT CGGCGTGCCG
CCGTCGACCG TGCCGATCCG GGTCGCGGAG GGGCAGCGCT ACCCGTACGT GTCGGCCGGG
TTCACCGGGA CGAGGCGGGA CGTGGAGCTC ACCAGGGGCA TCCGCACCTG CCTCGACCAG
GAGCACCCCG GCGGCTCGCC GACGAACCGG GTCGGCGCGT GGGAGTGCCA CGGCGGTGCG
AACCAGCGGT GGGCGCTGCA CTGGCTGGGG CTGGACCGGG TGGCGGTGGT GAACGCGGCC
ACCGGCGACT GCCTCGACCA GGAGACCCCG GCGGGCGCGC CGACCAACGT CGTGGGGGCG
TGGGGGTGCA ACGGAGGGTC GAACCAGAAG TGGGTCATCG GCAGCTCGGC GTACGACCGG
CCGGAGCTGC TGGTGAACGC GGCGAGCGGC ATGTGCTTGG ACCACGAGCA CCCGACCGGG
ACGCCGACGA ACCGGGTGGG GGCGTGGTGG TGCAGCGGGG CGGTCAACCA GGAGTGGGAC
ATCCGGTAG
|
|---|
| Protein sequence | MRRSVVPRRC APRRLRRTGA LLAALCATAG LVTGTASAEV AGAVVGRVWF DRDGDGARDP
EEPGRAGVVV HALGVLAFRT TTDVNGEFRV PHLPVGEYRL TAESEGYEVI GAREVVVQVG
AEPVDVGFAQ RGGEISGYGW WDSSGSGAFD SGEGVVAATW KIAGFSDYEG WVSRQVSAPG
QYAFRDLPAG VYRVEVDGPG WPTKYRADKD MRNSDVLGVP PSTVPIRVAE GQRYPYVSAG
FTGTRRDVEL TRGIRTCLDQ EHPGGSPTNR VGAWECHGGA NQRWALHWLG LDRVAVVNAA
TGDCLDQETP AGAPTNVVGA WGCNGGSNQK WVIGSSAYDR PELLVNAASG MCLDHEHPTG
TPTNRVGAWW CSGAVNQEWD IR
|
|---|
| |