Gene Amir_3148 details

Gene Information

• Locus tag: Amir_3148
• ID: 8327338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 3634832
• End bp: 3635521
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644943666
• Product: ThiJ/PfpI domain protein
• Protein accession: YP_003100906
• Protein GI: 256377246
• COG category: [K] Transcription
• COG ID: [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCGCT TCCTGTGCCT GCTGTTCCCG AACGTCACCC AACTCGACCT GACCGGTCCC 
GCGCAGGTGT TCTCCCGCCT GCCGGGAGCG GAGGTCGAGC TGGCCTGGCA CGACCTGTCC 
CCGGTCCCCA CCGACGCGGG GTTCTCGATC GTGCCGACGA CGACGCTGGC CGACGCAGGG 
CAGGCGGACG TGCTGTTCGT GCTCGGCGGG CAGGGCGCGT TCGAGCTGTT CGAGGACGAG 
GTGGCGCTGG AGTTCCTGCG CCGCCAGGCG GCGGGCGCGC GGTTCGTGAC GAGCGTGTGC 
ACCGGCTCGT TCACCCTCGC GGCGGCCGGC CTGCTGACCG GCAGGCGCGC GACGAGCCAC 
TGGGGTTCGC TGCCGCTGCT GGCGGGGCTG GGCGCGGTGC CGGTGGCGGA GCGGGTGGTG 
CGGGACGGGA ACGTGGTGAC CGGGGCGGGG GTGTCGAGCG GGGTGGACTT CGCGCTGTCG 
CTGGCCGCCG AGCTGTTCGG CGACGCGGAG GCGAAGCGGG TGCAGCTGAT GATCGAGTAC 
GACCCGAGGC CCCCGTTCGA CGCGGGCGGC CCGACCCGCC CGGACGTGGA CCCCGACGAG 
GTCGCGGCGA TCACGGCCCG GTTGGCGGCG GCGCGCGGGC CGCTGGTGGC GCGGGCGGCG 
GAGCGGTTGC GGCTTGACAG CCGGAGCTAA 

 

Protein sequence

MTRFLCLLFP NVTQLDLTGP AQVFSRLPGA EVELAWHDLS PVPTDAGFSI VPTTTLADAG 
QADVLFVLGG QGAFELFEDE VALEFLRRQA AGARFVTSVC TGSFTLAAAG LLTGRRATSH 
WGSLPLLAGL GAVPVAERVV RDGNVVTGAG VSSGVDFALS LAAELFGDAE AKRVQLMIEY 
DPRPPFDAGG PTRPDVDPDE VAAITARLAA ARGPLVARAA ERLRLDSRS