Gene Amir_3123 details

Gene Information

• Locus tag: Amir_3123
• ID: 8327313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3607447
• End bp: 3611625
• Gene Length: 4179 bp
• Protein Length: 1392 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644943642
• Product: hypothetical protein
• Protein accession: YP_003100882
• Protein GI: 256377222

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCTT CCGAGCCCTT CGACGTCGGT GGACCGGGCT CGCCGGGCGC GGGACTGCTG 
CGGATCTCCA CGCACTCCGG GCAGCCGGTG GGACTGGGTT TCCTGATCAC CGACCGGGTG 
GCGCTCACCT GCGCGCACGT GCTGGCCTCG GCGCTGGGCG GCCACCCGTC CGCAGGTTCC 
CCGGTCGTGG TGGACCTGCC CCTGCTCACC ACGGGGGCGC CCCTCGCCGG GCGCGTCGAG 
TGGTGCTCGC CCCCCGACGG CGACGACCTC GCCCTGCTGG TCGTGGACGC CGCCCCGCCC 
GGCGCACGCC CCCTGCGGCT GGTGCGGGTG GACGAGCCGT GGGGGCGTCC CGTCCGGGTC 
TTCGGGCTTC CCGCCGGACG ACCCGGCGGG GTGTGGCACA GCGGGGTGCT GCGCGAGCGG 
CAGGCCGACG GCTGGGTCCA GGTCGACCTG GTGGGGGAGG GCTACCGCAT CTCGCCCGGT 
TTCAGCGGCG GGCCGGTGTG GGACGAGGAG TCGGCCGGGG TGGTCGGGGT GGTGGTGGCG 
GCCGAGGCGC GCACCCCGCC CGTCGGGTAC CTCGTCCCCA CCTCGGCGGT GCTCGACGCC 
CGCCCCGACC TGCGCCCGCT GGTGCTGCCG TCCTCCCCCT TCCGCGGGCT GCGCCCGTTC 
ACCGAGGCGG ACGCGGCGCT CTTCCGCGGC AGGCGTGCGG AGAGCGCCGA GGTGGCGGAC 
CTGGTCGGGA CGCGGCGGTG GACCACGCTG GTCGGGCCGT CCGGCTGCGG CAAGTCCTCG 
CTGGTGCTGG CCGGGGTCCT CCCGCGACGG CGCGCGGCGG GCGACCTGCC CGCGGTGCTG 
CGGCCCGGCC ACCACGCCAG CCCCGTGCAC GCGCTGGCCG CCGCGCTCGC GCCGCTGCTG 
GAACCGGGGC TGGAAGGCGC CCGGTTGATC ACCGAGACCG CGAGCCTGGC TCGGGTGCTG 
GCCGGGGACG GGTTGCGCGC CCTGGCGCCC CCGCTGCTGG AGCGGCACGG CGCGGACCGG 
CTGCTGGTGG TCGTGGACCA GTGCGAGGAG CTGCTGGCGC TCCCGCCCGC CGAGGTCGAC 
GCGCTGGCGG AGGCGCTGTT CGGCGACCGC GTCCCGCAGG AGGTCGCGGT CCTGTGCGCG 
CTGCGGGCGG ACTTCCTCGA ACCGGCGCTG GCCCACCCCC GGCTCGGACC GGTGCTGGGC 
AGGCGCGTGC ACGCCCTGGC GCCGATGCGC GCGGACCAGC TGCGCGAGGT GGTCACCGGC 
GCGGTGGACG GCACCCCCGG CGTGCGCTAC CAGCCGAACC TGGCCGACCG CGTGCTCGCC 
GACGCCGGGG ACGGGCCGGG GGCGCTGCCG CTGCTCGGCT TCACCCTCGC CCTGCTGTGG 
GAGCGGCAGG AGCGCGGCGT GCTCACCCAC CACGCCTACG ACGGGATCGG CGGCGTCGCG 
GGCGCGCTGG GCGGCTACGC CGAGGCCGCC TGGGCCCGCG TGGAGGACGA CCCGGCCGCC 
GAACGCCTGC TCACCAGGCT GGTGCGCCTG CCCCTCGGCG CGCCCGCCGC GACCAGGCGG 
GCCGTGCCCC GCGCCGAGCT GGACCCCGAC GAGCTGCGCG CGGCCCGACT GCTGGCCACC 
ACCAGGCTGC TCGCGCTCAC CGACGACGAC CGGGTCGAGC TGGCGCACGA GGCGCTGATC 
GCCCACTGGC CCCGGCTGGT CAGGCTGATC GCCGACCGGA GGGCCTTCCT GGACTGGCGG 
GAGTCGCTGC GCTACGACCT GGAGCGCTGG ACCCGCGCGG GCGCCCCGCC CGACCTGCTG 
CCCAACGCGA CCGCGCTGGC CGCCGCGCGG CAGTGGCTGC CGGGCCACGC CGCCGACCTC 
GCCGTGCCGG AGCGCGACTA CCTGCGTCGC GGCCACCGGC GCCAGCGCGC CAGGACGCGG 
GGCAGGCGGG CCTGGCTCAC CGCCGCGGTG CTGCTGCTGG TGACGGCGGT GACCGCGGGC 
GCCTTGCTCG TCTCCACCCG GCGGGAGAGC GACGAGCGGC GGGCGCTGGC CGAGTCCAGG 
GCGCTGGCCC TGGCCGCGCA GGACGTCGTC GGGTCCGACC CGGCCCTGTC GGTGATGACC 
GCGCTGGCCG CGTACCGGCG TTCACCGACG CGGGAGGCGC GCGACCAGCT CCTCCAGCAC 
CGCCTCAGGC ACGCGACGGC CACCCGCGTG CTGTCCGGGG CGCCGGGCCC GCTGGCGACG 
GCCGAGACCA GCCGGGACGG CGACGTCGTG CTCACGGTCA CCGACGTCGG CCGCACGACG 
CTGACCGTCC ACGCGGCGAC CGGGGAGGTG CGCAACGCCG AGGTCCCCGT CCAGCACGTG 
CTGTACGCCC TGGTCGCGCC GGACGGGAAG CGGGCCGCGT TCGTGGAGGA CGACGGCGAC 
GCGGGCTGGT TCGAGGTGCG CCCCGACGCC GAGCGGATCG TCGGGCAGGT GCGCCGGCTG 
CCGAGGGCGG TGGGGCTCAA GGCGTTCACC CAGCACCCGC ACGACTCGGC GGCGATCTCC 
GCCGACGGCG GGCTGGTCGC CGTCACCACC GGGGACCGGT TGCTCTGGTG GGACCTGGAC 
GCGGGCACGG TCGCCGGGAC CGCGCCGCTG CCCCTCGACG CGGGCAACGG GCTGTGGTTC 
GGGGCGGACG ACCGGACCCT GCTCGTCAAG ACCTTCCACG ACGTGGGCGC CGCGTCCGCC 
GAGGGACTGG TGGCCGCCGA CCTGGCCACC GGGGAGGTCC GCAGCGTGCT CGACCCCGTC 
GTGGACCGGG AACTGCTGGT GTCCGGTGAC CGGACCGGCG TCGTGACCTG CAGGAGGGAC 
GAGTCGGGGG GACGGGTCCA GCTCCTGCGG GTCGCCGACG GGATCGAGCT GGGCGCCGCG 
ATCCCCACCA CCCGGTGCGC CCTGGTGTCG ACCGACGCGA CGGGGCACCG CACCGTCGTG 
CGCGAGGACG GGCTGGTCCT GGTGGACCTC GGCGCGGGCG CGGTGGTCTC GGACGTCGTC 
CAGCGCGCGG CCGAGCGCCC CGTCGCGTTC CTGTCGGGGC TGGTCGAGTC CGGCGGCGAC 
CTGCTGCTGG GCGCGCTGCA CCCCTGGGGC GTCACCTACA CCACCCTGCC CACCGGGAAC 
CAGGTGCTGG ACGCGGACGA CGGGGTGCTC ACCCCCGACG GCGCCGGGAC GGTCACCCGG 
CTCACCGACG GCCGGCTCCA GCTGCGCCCC TCGGGCGAGG ACAGCGGTTC GCCGCTGGCC 
GAGCACCCAG GGACGCCGCC GCTCGCACCG CGCCTGCGCG AGCACCTCCT GGCCGTCGAC 
CCGTCCGGTG AGCTGCTGGT CAACCGCACG GGCGAGCACG AGATCACCGT CCACCAGCTC 
CCCTCCCTGC GGGAGCTGAC CCGGATCACC GCCGTCGCGC ACCCGCCCGA CCCCTCGGGG 
AAGGACGTGG GCTTCACCTA CCACTTCGAC CGGAACGGCG GCGTGGTGAC CGTCTCCGGC 
ACGGTGGTGC AGCAGTGGGA CGCGCGTCGG GGCGAGGAGC TCGCGCGCTT CGACGCGAAG 
GCCCTGCTCC CGCCCGGCGC CCCGCCCAGC GCGCTGGCCG TGGCCCCCTA CCCGCTGCAG 
GGCCACGTGG CCGTCCTGGT CCGGGAGGGG ACGACCGCCC ACGTGATCGA GTTGGCCACC 
GGGCGGACGA CCGGGACCGT CGAGGTGCCC CCGTACACCT ACGGCCTCCA GTTCGACCCC 
AGCGGTCGCT ACTTCGCGGT GCTGCGCACG GGCACCGCCG TGGAGCTGTG GCGGCGCGAT 
CCGCACCGCA GGGAGCTCGG GATCGGGAGC AGCCTGTCGA GCGGGAACGC CGCCGGGTGG 
CGGGCGGGGT TCCTCGACGA CGAGGGGCGC TACCTGGTCG CCGCGAACAA CGCCGTGCGC 
GTCTACCGGA TCGGCGACAA GGCCCCGGTC GACTCCTACG AGTTCGCCTT CCCCGACAGC 
GGGAACCACC ACTTCGTCGA CGTCTCCGCT GACGGGGGAA CGGTGCTCTA CCAGGAGGTG 
GGCGCGTTCG GCGGGCCGGG CGGACCGGGC GGCGCGCTGG CGCTCGACCC GGTGGCCTGG 
CAGCGCGACC TGTGCCGGGT CATCGGCGAC CGCGCCTTCA CCGAGGACGA GCGCGACGCC 
CTGCCGCCCG GCGTGGACTC CCTCCGGGTG TGCCGGTAG 

 

Protein sequence

MPASEPFDVG GPGSPGAGLL RISTHSGQPV GLGFLITDRV ALTCAHVLAS ALGGHPSAGS 
PVVVDLPLLT TGAPLAGRVE WCSPPDGDDL ALLVVDAAPP GARPLRLVRV DEPWGRPVRV 
FGLPAGRPGG VWHSGVLRER QADGWVQVDL VGEGYRISPG FSGGPVWDEE SAGVVGVVVA 
AEARTPPVGY LVPTSAVLDA RPDLRPLVLP SSPFRGLRPF TEADAALFRG RRAESAEVAD 
LVGTRRWTTL VGPSGCGKSS LVLAGVLPRR RAAGDLPAVL RPGHHASPVH ALAAALAPLL 
EPGLEGARLI TETASLARVL AGDGLRALAP PLLERHGADR LLVVVDQCEE LLALPPAEVD 
ALAEALFGDR VPQEVAVLCA LRADFLEPAL AHPRLGPVLG RRVHALAPMR ADQLREVVTG 
AVDGTPGVRY QPNLADRVLA DAGDGPGALP LLGFTLALLW ERQERGVLTH HAYDGIGGVA 
GALGGYAEAA WARVEDDPAA ERLLTRLVRL PLGAPAATRR AVPRAELDPD ELRAARLLAT 
TRLLALTDDD RVELAHEALI AHWPRLVRLI ADRRAFLDWR ESLRYDLERW TRAGAPPDLL 
PNATALAAAR QWLPGHAADL AVPERDYLRR GHRRQRARTR GRRAWLTAAV LLLVTAVTAG 
ALLVSTRRES DERRALAESR ALALAAQDVV GSDPALSVMT ALAAYRRSPT REARDQLLQH 
RLRHATATRV LSGAPGPLAT AETSRDGDVV LTVTDVGRTT LTVHAATGEV RNAEVPVQHV 
LYALVAPDGK RAAFVEDDGD AGWFEVRPDA ERIVGQVRRL PRAVGLKAFT QHPHDSAAIS 
ADGGLVAVTT GDRLLWWDLD AGTVAGTAPL PLDAGNGLWF GADDRTLLVK TFHDVGAASA 
EGLVAADLAT GEVRSVLDPV VDRELLVSGD RTGVVTCRRD ESGGRVQLLR VADGIELGAA 
IPTTRCALVS TDATGHRTVV REDGLVLVDL GAGAVVSDVV QRAAERPVAF LSGLVESGGD 
LLLGALHPWG VTYTTLPTGN QVLDADDGVL TPDGAGTVTR LTDGRLQLRP SGEDSGSPLA 
EHPGTPPLAP RLREHLLAVD PSGELLVNRT GEHEITVHQL PSLRELTRIT AVAHPPDPSG 
KDVGFTYHFD RNGGVVTVSG TVVQQWDARR GEELARFDAK ALLPPGAPPS ALAVAPYPLQ 
GHVAVLVREG TTAHVIELAT GRTTGTVEVP PYTYGLQFDP SGRYFAVLRT GTAVELWRRD 
PHRRELGIGS SLSSGNAAGW RAGFLDDEGR YLVAANNAVR VYRIGDKAPV DSYEFAFPDS 
GNHHFVDVSA DGGTVLYQEV GAFGGPGGPG GALALDPVAW QRDLCRVIGD RAFTEDERDA 
LPPGVDSLRV CR