Gene Amir_3113 details

Gene Information

• Locus tag: Amir_3113
• ID: 8327303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 3596668
• End bp: 3598617
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644943633
• Product: plasmid-related protein
• Protein accession: YP_003100873
• Protein GI: 256377213

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCTGGC AGCTCACCTC GCTGACCCTG TACGGCCGAC GTCCCGGCCA GGTGCGCACC 
CTGGACTTCG AACCGGGCGC CCTCAACATC ATCACCGGTG ACTCGCTGAC CGGGAAGACC 
TCGCTCTGGA CGATCGTCGA CTACTGCATG GCCAGCAACG ACTACCCGGT CAGCGCAGGG 
GTCGTGCGCG ACCACGTGGC CGTTTTCGCC ATCCAGATCA CCAGTGGCGA CCGCAGGCTG 
TTCATCGCAC GCCCGTCGCC GCTCAAGGGC ATCACCCCCG CCTCCACCAA GCTGTGCTTG 
GTCCAGCAGC AGCTCGGTGA CGCGCCGCTG GCGCGCGAGG AGATGCGCTT CACCTTCGCC 
TTGGACGCAG CCCGCGGACA GCTCGCCGAC TTCTGCGGGA TCGACCGCAC GGTGCGCCTG 
CCCAGCACCA GGGGCAACAC GATGTCCCCC TCGATCCGGC AAGTGCTGTT CTTCTGCGCC 
CAGGGGCAGA ACGAGATCGC CAACCCCGAG CAACTGTTCC ACTCCCAGGG GCGCGACCAC 
CACACCCAGG CGATCCGGGA CGTACTCCCC TACTTCCTCG GGGCGGTCGA CCCCGAGCAG 
GCTGCCCTGC GCGCCCGGTT GCGCCGACTG CGGGCCGATC TGCGCGACCA CGAGCGCGAA 
CTCGCCAGGC AGGAGGCAGC CACCCCCGCG CCGGGGCAGG CGCGGGCGCT GGTCAGGGAG 
GCGATCGAAG TCTCGCTGCT CCCCCAGCGC TCCGTGGACG ACCTCACGGG AGAGGAGGCC 
CTGCGGCTGC TGACCGAAGC CGTGCGCGCT CCGCTGCCCG GCGGCGCCGA GATCCCGACC 
GGCACCGACG ACCCGTTCCA GCACCTGGAG CAGCAGCGCA GCGAACTGCG CAGCGCCTAC 
CACCAGGCAC GGGCGCGGCT GACGGCTCTG AAGCAGGCGC TGCGCGAGCG CGGCGACTTC 
CTCACCCACG CCATCGACCA GCACGAACGG CTGGCCTCGC TCAACCTGCT GCGCATCGGG 
AACGAGACCT CCACCGACCG GTGCCCGGTG TGCGGCAACG AGGTCACCGA CGCCAACGAG 
ACCATCTCCG CGCTGCGCGC CGACCTCGAG CACCTGGACG CGGACGTGGT GTTCGTCAAC 
GACGACACCG CCCAGCTCCA GAGCCTGATC ACCCAGGTCG AGGAGGAGCA GCGCGAACTG 
CGTCAAGCCC TGAGCGCCAA CAACGAGGAG CGTGAAGTCC TCGAAGCGGG CGCCCGCGCG 
ATCGCGCGCT TCCACGACAG CGCGCTGCGC GCGGCCTCGG TCACCGGCAG GATCAGCCTC 
TTCCTGGAGA CCACAGGCCG GTTGGCCGTC GCACCGCGCA TCCCGGACAG GCGCGAGGTG 
CTGCGGGCCG GCATCCAGGC GCTGGAAGAC CTCCTCAGCG ACGACGTCCA GGCCGACCGC 
CTGAACAGCA GTCTCTCCCT GATCAACCGG AAGATCTCCA CCAAAGCCCG CGCGCTGCGC 
CTGGAGCACT CCGAGGCGCC CGTGCGGCTG GACCTGCGCC AGCTCAGCGT CGTGGCCGAC 
ACCTCAGCGG GCCCGGTGCC CCTCAACGAG ATGGGCGGCG GGGAGAACTG GCTCGGCTAC 
CACTTGGCCG TGCTGCTGAG CCTGCACGAG TGGTTCACCG AGCACGACCG TCCCGTGCCG 
CGACTACTCG TCCTGGACCA GCCCTCACAG GTGTACTTCC CCGCCGACTA CAGGAACGCA 
GGTCTGGAGC CGGAACGTGA GTCCGACCGG ATCGCCCTGC TGCGCGCCTA CCAGGTGATC 
GCCGACACGA TCAACGGTCT CGGCGGCGCC CTGCAGGTGA TCGTCATGGA GCACGCGGAC 
CTCGAGCAGG AGGTCTTCAG CTCCGCCGTC ATCCAGCGCT GGCGACAGGG ACAGGGGGCG 
CTGGTACCGA CCGACTGGAC CAGAGCGTGA 

 

Protein sequence

MTWQLTSLTL YGRRPGQVRT LDFEPGALNI ITGDSLTGKT SLWTIVDYCM ASNDYPVSAG 
VVRDHVAVFA IQITSGDRRL FIARPSPLKG ITPASTKLCL VQQQLGDAPL AREEMRFTFA 
LDAARGQLAD FCGIDRTVRL PSTRGNTMSP SIRQVLFFCA QGQNEIANPE QLFHSQGRDH 
HTQAIRDVLP YFLGAVDPEQ AALRARLRRL RADLRDHERE LARQEAATPA PGQARALVRE 
AIEVSLLPQR SVDDLTGEEA LRLLTEAVRA PLPGGAEIPT GTDDPFQHLE QQRSELRSAY 
HQARARLTAL KQALRERGDF LTHAIDQHER LASLNLLRIG NETSTDRCPV CGNEVTDANE 
TISALRADLE HLDADVVFVN DDTAQLQSLI TQVEEEQREL RQALSANNEE REVLEAGARA 
IARFHDSALR AASVTGRISL FLETTGRLAV APRIPDRREV LRAGIQALED LLSDDVQADR 
LNSSLSLINR KISTKARALR LEHSEAPVRL DLRQLSVVAD TSAGPVPLNE MGGGENWLGY 
HLAVLLSLHE WFTEHDRPVP RLLVLDQPSQ VYFPADYRNA GLEPERESDR IALLRAYQVI 
ADTINGLGGA LQVIVMEHAD LEQEVFSSAV IQRWRQGQGA LVPTDWTRA