| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3107 |
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| Symbol | |
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| ID | 8327297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3587729 |
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| End bp | 3590044 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943627 |
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| Product | protein of unknown function DUF1680 |
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| Protein accession | YP_003100867 |
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| Protein GI | 256377207 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0859472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCTCAC CGCTGAGCAG GCGCACCCTG TTCCAGGCCG CAGGCGTCGC CGTCGCGGCC
ACCGCCGTCC CCGGTCTCGT CCAGGGCGTC GCGCGGGCCG CGTCCGTGCC GCCCGCCCGC
CCGGACATCG GCGCGGCGGC CTCCGCGTTC GACGTCGGCC AGGTCCGGCT GACCCCCGGC
CGCTGGATGG ACAACCAGAA CCGCGCCCTG TCCTACCTGC GCTTCGTGGA CCCGGACCGG
CTGCTCTACA ACTTCCGCGC CAACCACCGC CTGTCCACGG CGGGCGCCGC GCCGCTGGCC
GGGTGGGAGG CCCCGGACTT CCCGTTCCGC ACCCACAGCC AGGGCCACTT CCTCACCGCC
TGGGCGCAGG CGTGGGCCGT GCTCGGCGAC ACCACCTCCC GCGACCGCGC CAACCACCTG
GTCGCCGAGC TGGCCAAGTG CCAGGCCAAC AACGCCGCCG CGGGCTTCAC CGCCGGCTAC
CTCTCCGGCT TCCCCGAGTC GGACCTCGAC GCCCTGGAGG CCGGGACCCC CAAGGCCGTC
TCCTACTACG CCCTGCACAA GACCCTGGCG GGCCTGCTGG ACGTCTGGCG GCACCTCGGC
AGCACCCAGG CGCGCGACGT GCTCCTGCGC TTCGCGGGCT GGGTCGACTG GCGCACCGCC
CGCCTGTCGC AGGCGACCAT GCAGCGCGTG CTGGCCACCG AGTTCGGCGG CATGAACGCC
GTCCTGGCCG ACCTCTACCA GCAGACCGGC GACGCCCGCT GGCTGGCCAC GGCCCAGCGC
TTCGACCACG CCGCCGCCTT CGACCCCCTG GCCGCGAACC AGGACCGCCT CAACGGCCTG
CACGCCAACA CCCAGGTCCC CAAGTGGATC GGCGCGGCCC GCGAGTACAA GGCCACCGGC
ACGACCCGCT ACCGCGACAT CGCCACCAAC GCCTGGAACA TCACCGTCGC CGCGCACACC
TACGTGATCG GCGGCAACAG CCAGGCCGAG CACTTCCGCG CCCCCAACGC CATCGCCGCG
CACCTGGCCA CCGACACGGC CGAGGCGTGC AACACCTACA ACATGCTCAA GCTGACCCGT
GAGCTGTGGC TGCTGGAGCC GACCAAGGCG GCCTACTTCG ACTTCTACGA GCGCGCCCTG
CTCAACCACC TGATCGGCCA GCAGAACCCG GCCGACGCCC ACGGCCACAT CTGCTACTTC
ACCGGCCTGA ACCCCGGCCA CCGCAGGGGT CGCACGGGGC CGGCGTGGGG CGGCGGCACG
TGGAGCACCG ACTACAGCAC GTTCTGGTGC TGCCAGGGCA CCGGCATCGA GACCAACACC
AAGCTCGCCG ACTCGATCTA CTTCCGCGAC GGCACGACGC TGACCGTCAA CCTCTACACC
CCGTCCACCC TGACCTGGTC GGAGCGCGGC ATCACGGTCA CCCAGAGCAC CACCTACCCG
GCGAGCGACA CCACCACGCT CACCGTGACC GGCAGCGCGA GCGGCTCGTG GACGATGCGC
CTGCGCATCC CCGCGTGGAC CTCGGGCGCG ACGGTCGCGG TCAACGGCAC GCCCCAGAAC
GTGGCCGCAG CACCGGGTTC CTACGCCTCC CTGACCCGCT CCTGGACCTC GGACGACACC
GTCACCCTCC GCCTGCCCAT GCGCGTGACC ACGGCCCCCG CGCCCGACAA CCCGAACGTC
GTCGCGGTCA CCTACGGCCC GGTCGTCCTG GCGGGCAACT TCGGCAGCAC CACCCTGTCC
GCGCTACCCG CGCTCGACGT CGCCTCGATC ACCCGCACCA GCACCACCGC GCTCACCTTC
ACCGCCCGCT CGGGCGGCTC GACGGTGAAC CTCGGCCCGT TCCACGACGC CCACGGCTTC
AACTACACCG TCTACTGGAG CATCGGCGGC GGCACGACCA CGCACCGACT GGTCAACGCC
GCCAGCGGCC TGGTCCTGGG CATCCGCGAC ATGTCCACCG CAGACGGCGC GCCGGCCCTG
CAGTGGGGCG ACACCGGAAC CGCCGACCAC AACTGGGAAC TCGTCCCGGA CGGCTCCGAC
GTGCGCTTCC GCAACGTCCA CAGCGGCAAG GTGCTGGGCG TGGAGAACAT GTCGACCGCG
AACGGCGCCC GCGTCCTGCA GTGGGGCGAC ACGGGGACCG CCGACCACCG GTGGACCCTG
ATCGACAACG GCGACGGCAC CCACCGCATC CGCAACGCCC ACAGCGGCAA GCTCCTGGCG
ATCGAGAACA ACTCCACCGC CCAGGGCGCG CCGGCCGTCC AGGACTCGGA CAACGGCACC
CCGGACAACC GCTGGAGGCT GGTGCGCAAC GGGTGA
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| Protein sequence | MPSPLSRRTL FQAAGVAVAA TAVPGLVQGV ARAASVPPAR PDIGAAASAF DVGQVRLTPG
RWMDNQNRAL SYLRFVDPDR LLYNFRANHR LSTAGAAPLA GWEAPDFPFR THSQGHFLTA
WAQAWAVLGD TTSRDRANHL VAELAKCQAN NAAAGFTAGY LSGFPESDLD ALEAGTPKAV
SYYALHKTLA GLLDVWRHLG STQARDVLLR FAGWVDWRTA RLSQATMQRV LATEFGGMNA
VLADLYQQTG DARWLATAQR FDHAAAFDPL AANQDRLNGL HANTQVPKWI GAAREYKATG
TTRYRDIATN AWNITVAAHT YVIGGNSQAE HFRAPNAIAA HLATDTAEAC NTYNMLKLTR
ELWLLEPTKA AYFDFYERAL LNHLIGQQNP ADAHGHICYF TGLNPGHRRG RTGPAWGGGT
WSTDYSTFWC CQGTGIETNT KLADSIYFRD GTTLTVNLYT PSTLTWSERG ITVTQSTTYP
ASDTTTLTVT GSASGSWTMR LRIPAWTSGA TVAVNGTPQN VAAAPGSYAS LTRSWTSDDT
VTLRLPMRVT TAPAPDNPNV VAVTYGPVVL AGNFGSTTLS ALPALDVASI TRTSTTALTF
TARSGGSTVN LGPFHDAHGF NYTVYWSIGG GTTTHRLVNA ASGLVLGIRD MSTADGAPAL
QWGDTGTADH NWELVPDGSD VRFRNVHSGK VLGVENMSTA NGARVLQWGD TGTADHRWTL
IDNGDGTHRI RNAHSGKLLA IENNSTAQGA PAVQDSDNGT PDNRWRLVRN G
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