Gene Amir_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3088 
Symbol 
ID8327278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3567005 
End bp3567547 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content73% 
IMG OID644943609 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003100849 
Protein GI256377189 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTG AGACTTCGGA GAGCGGGGAA ACCGCAGCTC AGGGACCCAA AGACTCGAAC 
GGGTACGACG ACGGGAAAGT CGTCTGGGAG CCCCGCTGGC TCGACACGGG TGAGAAGGAG
GCCTGGACCG CCCTCGTCTC CCTCGTCCTC CTGCTCCCCG GCAGGCTGGA GTCCCCGCTC
CAGCAGGAGG CCGGGCTGAC CCTGTTCGAG TACCTCGCCC TCAGCCACAT CTCCGAGGCC
CCCGACCGCC GCCTCCGGAT GAGCGAGCTG GCCTACCTCG CCAACGGCTC CCTGTCCCGC
CTGTCCAACG TCGTCAAGCG CTTCGAGCAG CGCGGCTGGG TCGAGCGCTC GCCCGACCCG
GCGGACGGCC GCTACACCCT CGCCGCCCTC ACCGACGCCG GGTTCGCCGT GGTCCAGGCC
GCCGCTCCCA CGCACCTGCG CGCGGTCCGC GAGCTCGTGC TCGACCCGCT CACCGCCGAC
GAGCAGCGCG CCCTCGCCGA GATCGCCGCC AAGCTCCGCG CCCGCCCGGT CGACCTGGCC
TGA
 
Protein sequence
MAGETSESGE TAAQGPKDSN GYDDGKVVWE PRWLDTGEKE AWTALVSLVL LLPGRLESPL 
QQEAGLTLFE YLALSHISEA PDRRLRMSEL AYLANGSLSR LSNVVKRFEQ RGWVERSPDP
ADGRYTLAAL TDAGFAVVQA AAPTHLRAVR ELVLDPLTAD EQRALAEIAA KLRARPVDLA