| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3045 |
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| Symbol | |
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| ID | 8327235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3520733 |
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| End bp | 3521923 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644943570 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_003100810 |
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| Protein GI | 256377150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02635] L-rhamnose isomerase, Streptomyces subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0111676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCACCCG TGCCCGAGCC GACCCCCGAG CGGTTGAGCG CAGTCAAGCA AGCCCTGTCC
CGGCAAACGA TCGAGACCCC GTCGTGGGCG TTCGGCAACT CCGGCACCCG CTTCAAGGTC
TTCGCGCAGG CCGGTGTGCC GCGCACCGTC GAGGAGAAGG TCGACGACGC CGCCGCGGTG
CACCGGTTCA CCGGCGTCGC GCCGTCCGTC GCGCTGCACG TCCCGTGGGA CCGGGTGGAC
GACTACGGCG CGCTCGCCCG GTACGCCGCC GACCGGGGCG TGCGGCTGGG CGCGATCAAC
ACCAACGTCT TCCAGGACGA CGACTACAAG CTCGGCTCGG TCACCAACCC CGACCCGCGG
GTGCGGCGCA AGGCCACCGA CCACCTGCTG CACGCCGTGG ACGTCATGGA CGCCACCGGG
TCGTCCGACC TGAAGCTGTG GTTCTCGGAC GGGACCAACT ACCCCGGCCA GGACGACCTG
CGCGACCGCC AGGACCGGCT CGCCGCCGCG CTGCGCGAGA CGTACGCCCG GCTCGGCGAC
GGCCAGCGGC TCCTGCTGGA GTACAAGCTG TTCGAGCCCG CCTTCTACGC CACCGACGTC
CCGGACTGGG GCACCTCGTA CGCGCACTGC GCCGAGCTGG GCCCGAAGGC GCGGGTGTGC
ATCGACACCG GCCACCACGC GCCGGGCACG AACATCGAGT TCATCGTCGC CTTCCTGCTG
CGGCAGGACA AGCTCGGCGC GTTCGACTTC AACTCGCGCT TCTACGCCGA CGACGACCTG
ATGGTGGGCG CGGCCGACCC GTTCCAGCTG TTCCGGATCA TGAACGAGAT CGTGCGCGCC
GACGCGCTGG ACCCGGTGGC GGGCATCAAC TTCATGCTCG ACCAGTGCCA CAACATCGAG
GCCAAGATCC CGGCGGTGAT CCGGTCGGTG ATGAACGTCC AGGAGGCCAC GGCCAAGGCG
CTGCTGGTGG ACCGGGAGGC GCTGTCGGCC GCGCAGGCCG AGGGGGACGT GCTGGAGGCC
AACGCGGTGC TCATGGACGC CTACAACACC GACGTGCGCC CGCTGCTGGC GCAGGTGCGC
GCGGACGCCG GGCTCGACCC CGACCCCGTC GCGGCCTACA AGCGCAGCGG GTACCAGCAG
GAGATCGTGG CCGCGCGCGC CGACGGGCGG CAGGCCGGAT GGGGAGCGTG A
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| Protein sequence | MPPVPEPTPE RLSAVKQALS RQTIETPSWA FGNSGTRFKV FAQAGVPRTV EEKVDDAAAV
HRFTGVAPSV ALHVPWDRVD DYGALARYAA DRGVRLGAIN TNVFQDDDYK LGSVTNPDPR
VRRKATDHLL HAVDVMDATG SSDLKLWFSD GTNYPGQDDL RDRQDRLAAA LRETYARLGD
GQRLLLEYKL FEPAFYATDV PDWGTSYAHC AELGPKARVC IDTGHHAPGT NIEFIVAFLL
RQDKLGAFDF NSRFYADDDL MVGAADPFQL FRIMNEIVRA DALDPVAGIN FMLDQCHNIE
AKIPAVIRSV MNVQEATAKA LLVDREALSA AQAEGDVLEA NAVLMDAYNT DVRPLLAQVR
ADAGLDPDPV AAYKRSGYQQ EIVAARADGR QAGWGA
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