Gene Amir_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3039 
Symbol 
ID8327229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3513640 
End bp3514395 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content79% 
IMG OID644943564 
ProductGntR domain protein 
Protein accessionYP_003100804 
Protein GI256377144 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGTCGG ACCACACCAG GGCGCGGGCG GGGGTTGCGG TGAGCGGATT CGGGGTGGTG 
CTCGCGCACG TGGAGGCGGA GCTGGCGGCG GGCAGGCTCG TGGTGGGCGG GCAGCTGCCG
CCCGAGCGCA GGCTCGCGGG CGAGCTGGGG GTGAGCCGCT CGACGGTGCG CGAGGCGATC
CGGGCGCTCC AGGCGCTCGG CGTGGTGCGC AGCGGCGTCG GGTCCGGGCC GGACGCCGGC
ACCACGGTGA TCGCCGACCC GGCGGGCGGG ATCGGCGCGG CGCTGCGGCT GCACCTGGCC
ACCCGCAGGC TGCCGCTGGC GGACCTGGTC GGGACGCGGG TGCTGCTGGA GGGCGCGTCG
GCGCGGGCTG CGGCGGCGCG CGGGGACGCG GCGGAGCTGG CGGCGGCGGG CGAGCTGCTG
GACCGGATGG ACGCGCCGGG CATCGGCGCC GAGGAGTTCC ACCGGCTCGA CGCGGACTTC
CACGTCGCGC TCACCCGCGC GGCGGGGAAC GCGGTGAACA CCGCCGTCAT GACCGCGCTG
CGCGACGCGA TCCACCACAC CGTGCTGCGG GCGGTGGCGG AACTGCCGGA CTGGGCGGGC
ACGGCGCGGC GGCTGCGCGC GGAGCACCGG GCGGTGCTGG CGGCGGTGCT GGCGGGGGAG
GAGGACGCGG CGGCGGAGCT GGTGACCGCG CACGTGGAGG GGTTCCACCG GGAGTGGGAG
CGGGCGGGCC GCGGTGACCG GGGTGTTGAT CACTGA
 
Protein sequence
MWSDHTRARA GVAVSGFGVV LAHVEAELAA GRLVVGGQLP PERRLAGELG VSRSTVREAI 
RALQALGVVR SGVGSGPDAG TTVIADPAGG IGAALRLHLA TRRLPLADLV GTRVLLEGAS
ARAAAARGDA AELAAAGELL DRMDAPGIGA EEFHRLDADF HVALTRAAGN AVNTAVMTAL
RDAIHHTVLR AVAELPDWAG TARRLRAEHR AVLAAVLAGE EDAAAELVTA HVEGFHREWE
RAGRGDRGVD H