Gene Amir_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3015 
Symbol 
ID8327205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3484096 
End bp3485427 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content73% 
IMG OID644943541 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_003100781 
Protein GI256377121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.74257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTTGT CCGGTGATCG CGGGACCTTC CCCAGGAGAC TGCCCGTCGC GGCGGCGTTC 
GCGCTGCCCG GAGCCCTGCT CGGCGCAGCC GACTACCTGG GCCTCCCCCA CCCCGACCTC
CCGCCGCCGA TCGCCGCCGC GATCTTCGGC ATCGCCATCG TCGCCGCGGC GTTCCTGCTG
TCCTGGGCGG CCGAGGCGGC GCAGGTCGAC GTCAGCGCGG GCCTGGCCAT CGCGGTGCTG
GCGATGGTCG CGGTGCTGCC CGAGTACGCC GTCGACATGG TGTTCACCTT CGAGGCCGGG
CAGGTGTACG CCGAGCACGG CACGTGCGCC GGCCAGGGCG GGGCGAACCC GTGCTCGCTG
GCGCTGGCCA ACATGACCGG CGCGAACCGC ATCCTGGTCG GCATCGGCTG GCCGCTGGTC
GTGCTGGTCG CCGGGCTCGC CGTGCTGCGC AAGGGGCGCG AGCGCGGGCA GGAGCGACCG
GGGAGCGTGC GGCCCGGCCG GGTGGAACTG ACGCCGGTCA TGTCCGCCGA GGTGGTCTTC
CTGGGCGTGG CCACGCTGTA CTCGCTGACC CTGCCGCTGC GCGACAGCCT GACGTTCTTC
GACGCCGCCG TGTTCGTGTC GATCTTCGCC GCGTACACCT GGCGGCTGTC CAAGGCGCCC
GCCGAGGAGC CGGACCTGCA CGGGGTGTCG AAGTGGGTCG GCGAGCAGGC CAAGCGGCGC
AGGCGCGGGT GGGTCGCGGG CCTGTTCGGG TTCGCGGGCC TGGTGATCCT GGCCTGCGCG
GAGCACTTCG CGCAGAACCT CGTCGACACC GGCACCACGC TCGGCGTCGA CGAGTTCCTG
CTCGTGCAGT GGGTCGCGCC GCTGGCCAGC GAGGCGCCCG AGCTGATCGT GGCCTGCCTG
TACGCGATCC GGCTGGCCGC GTCCGAGTCG CTGGGCACGC TGCTGTCGAG CAAGGTCAAC
CAGTGGACGC TGCTGGTCGG CACGCTGCCC GTGGTGTTCG CGATCTCCTC GGGCGGCGTG
GACGGCCTGC CGCTGGACGA GCATCAGCGG TTGGAGCTGC TGGTCACGGC GGCGCAGTCG
CTGTTCGCGG TGAGCCTGCT GGTGGACCTC GGCATCGGCG CGGCGGGCGC GGCGACCCTG
TTCGGGCTGT TCGCGGTCCA GTTCACCACC AGCCTGCTGC TGCCCGCCGA GGCGAACCGG
GTGGTGGTGC TCGTGCTGTC TGGGCTCTAC GCGCTGCTCG CGGCGATCAG GCTCGTGCGG
AGGCGGGCCG AGCTGGCCCG CCTCGTCCGC GACGGGGTGA CGACGCCGTT CAGCGAGCTG
GCGCGCCGCT GA
 
Protein sequence
MTLSGDRGTF PRRLPVAAAF ALPGALLGAA DYLGLPHPDL PPPIAAAIFG IAIVAAAFLL 
SWAAEAAQVD VSAGLAIAVL AMVAVLPEYA VDMVFTFEAG QVYAEHGTCA GQGGANPCSL
ALANMTGANR ILVGIGWPLV VLVAGLAVLR KGRERGQERP GSVRPGRVEL TPVMSAEVVF
LGVATLYSLT LPLRDSLTFF DAAVFVSIFA AYTWRLSKAP AEEPDLHGVS KWVGEQAKRR
RRGWVAGLFG FAGLVILACA EHFAQNLVDT GTTLGVDEFL LVQWVAPLAS EAPELIVACL
YAIRLAASES LGTLLSSKVN QWTLLVGTLP VVFAISSGGV DGLPLDEHQR LELLVTAAQS
LFAVSLLVDL GIGAAGAATL FGLFAVQFTT SLLLPAEANR VVVLVLSGLY ALLAAIRLVR
RRAELARLVR DGVTTPFSEL ARR